Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2459 ATGTCAGAAGTGGATGAGTACCGTTGCTTTATTGGTGGCCTTTCGTGGTCAACATCTGATAGAAAGTTAAAGGATACATTTGAGAAGTTCGGCAAGCTTGTTGAGGCTAAGGTGGTTGTGGACAAATTCTCTGGGCGCTCTCGCGGCTTTGGATTTGTCACCTTTGATGAaaagaaagcaatggaagatGCTATTGAGGCTATGAATGGCATGGATTTAGATGGCCGAACTATCACTGTTGATAAAGCTCAGCCTCAACAAGGATCTTCTAGAGATGATGGCGATCGCTACCGTGAGCGGGGTCGTGGTGGCGGTGGTGGTCACTACGGTCCTGATAGGAATGCAGATCGTCATTCTGGTGGGCGCAGCAGGGACTCTGGTGGTCATGGAGATTCTGGAAGTGATCGTTATGGTCGTGATCGTGGGGGGCCTTATGAGCGACGAGGATCAGGAGGCTTTCGTTCTGGATAG 471 0.482 MSEVDEYRCFIGGLSWSTSDRKLKDTFEKFGKLVEAKVVVDKFSGRSRGFGFVTFDEKKAMEDAIEAMNGMDLDGRTITVDKAQPQQGSSRDDGDRYRERGRGGGGGHYGPDRNADRHSGGRSRDSGGHGDSGSDRYGRDRGGPYERRGSGGFRSG 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2459 156 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 7 85 IPR000504 GO:0003723
Sto13g2459 156 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 10 79 IPR000504 GO:0003723
Sto13g2459 156 SUPERFAMILY RNA-binding domain, RBD 4 113 IPR035979 GO:0003676
Sto13g2459 156 Gene3D - 2 117 IPR012677 -
Sto13g2459 156 MobiDBLite consensus disorder prediction 88 147 - -
Sto13g2459 156 SMART rrm1_1 8 81 IPR000504 GO:0003723
Sto13g2459 156 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN RZ1A 1 103 - -
Sto13g2459 156 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN RZ1A 95 154 - -
Sto13g2459 156 MobiDBLite consensus disorder prediction 75 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2459 Sto-Chr13 30949258 30950224 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2459 9 98 Eukaryotic Initiation Factors Gene Family AT4G34110 35.556 2.46e-08 50.1