Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2456 ATGGCTTCCAATGGAATCCCCTCCAACTCCAACTCCAACCACATTGACATTCCCATTAATATTCATAATACAACGCCAAAGCCAAAGCCTTCCATTGATGACCACGACGTAGACTACAGCCAGAGGGGGCAATGGCTCCGGGCCGCCGTGCTGGGAGCCAACGACGGCCTAGTGTCGGTGGCGTCGCTGATGATGGGAGTGGGAGGCGTGAAGCAAGACGCGGGACCCATGCTGGTCGCTGGATTTGCGGGCTTAGTGGCGGGTGCATGCAGCATGGCCATAGGAGAGTTCGTCTCCGTCTACACTCAGTACGACATAGAGAAGGCCCGCATCAAGAGAAGTGAGTCTAGTGATGATGAGGCCCATCAAGAGAAGCTCCCGAGCCCGTCTCGGGCCGCGCTGGCTTCTGCGCTTGCCTTCTCGGTGGGGGCCCTGCTCCCACTGCTGGGTGCGGCCTTCATAAGGGAGTATAGAGTGAGGATGGGTGTGGTTGCGGCTGTGGTTAGCCTGGCTTTGCTTGGCTTCGGAGGGGTGGGTGCGGTGCTGGGTAAGACTCCTGTCACCAGGTCGTGTGTTCGAGTCCTCATGGGTGGCTGGATGGCCATGGCTATCACTTTTGGCCTCACCAATCGAAGATGCAAAGACCCAATTGTCAAAGATTTACCACCATGGCAGTCGAAGATGCAAAGATCTTCGAGCCTTTTGGAGCTTGACGATGGATTAAGAGGTGTGGAGATACAGCAGAGAACTGCTTCATTCCGTGTTCAAATCCAGAAGGTGGAAAGGCAAGGCGTCGAGGTGGACCTGCAGGAAGTGTTCAATCGATTCAACTTCGATAATATCAGCTCCATCGTGTTGGGATCCGACCCGAAAAGCTTAGCCTTCGATTTCCTTGACGTTACGTGCGAGAAGGCTTTTAACGAAGTAGAGGAGTTCATATTCTACAGACACATTGTGCCCAAACCCATCTGGAAGTTCCAAAAATGGCTCAGGGTTGGTCCAGAGAAGAAGATGGCGGAAGTGAGTGCAACTTTTGACAAGTTCTTACGCGAAAGCATAATATCAAATCAGGGAAAAGCATGGGATGATGATCATAATAACAATGATGATGAGTGTGACTTGATCACACTTTTGATGAgacaggaagaaggagaagattgTGCGAATGACAAGTTTCTGAGGGACACAGCATCTAGTCTTTTCATTGCAGGAAAAGACACCATAACCTCTGCTCTCACATGGCTCTTTTGGCTCGTAGCCACACACCCATATGTGGAAGCTAAGATTCTTCAAGAGATGAAAatgaaagataataataataacgtaTATTTACATGGTGCTATATGTGAAGCTTTGAGGTTGTATCCTCCTATACCTTTTAAGTGA 1386 0.4885 MASNGIPSNSNSNHIDIPINIHNTTPKPKPSIDDHDVDYSQRGQWLRAAVLGANDGLVSVASLMMGVGGVKQDAGPMLVAGFAGLVAGACSMAIGEFVSVYTQYDIEKARIKRSESSDDEAHQEKLPSPSRAALASALAFSVGALLPLLGAAFIREYRVRMGVVAAVVSLALLGFGGVGAVLGKTPVTRSCVRVLMGGWMAMAITFGLTNRRCKDPIVKDLPPWQSKMQRSSSLLELDDGLRGVEIQQRTASFRVQIQKVERQGVEVDLQEVFNRFNFDNISSIVLGSDPKSLAFDFLDVTCEKAFNEVEEFIFYRHIVPKPIWKFQKWLRVGPEKKMAEVSATFDKFLRESIISNQGKAWDDDHNNNDDECDLITLLMRQEEGEDCANDKFLRDTASSLFIAGKDTITSALTWLFWLVATHPYVEAKILQEMKMKDNNNNVYLHGAICEALRLYPPIPFK 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2456 461 Pfam VIT family 46 121 IPR008217 GO:0005384|GO:0030026
Sto13g2456 461 Pfam VIT family 123 209 IPR008217 GO:0005384|GO:0030026
Sto13g2456 461 SUPERFAMILY Cytochrome P450 256 460 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto13g2456 461 MobiDBLite consensus disorder prediction 1 37 - -
Sto13g2456 461 CDD Nodulin-21 44 186 - -
Sto13g2456 461 Gene3D Cytochrome P450 225 460 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto13g2456 461 MobiDBLite consensus disorder prediction 1 27 - -
Sto13g2456 461 PRINTS E-class P450 group I signature 392 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto13g2456 461 PRINTS E-class P450 group I signature 412 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto13g2456 461 PRINTS E-class P450 group I signature 445 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto13g2456 461 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 2.1 10 210 - -
Sto13g2456 461 Pfam Cytochrome P450 246 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto13g2456 461 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 10 210 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2456 Sto-Chr13 30938871 30941741 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2456 6 210 Nodulin-like Gene Family AT3G43660 61.951 1.89e-82 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2456 K22736 - gmx:100802489 244.202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2456 13 30938871 30941741 Sto13g2456 13 30938871 30941741 ECH