Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2454 ATGGTCAGAAGTAATGATGTTATGACTGATGAGTTGAGTATCGCGGGAGCAGTTGAGCAATTGCCTAAGGATTTTCATCTAAAATCTGTGATTAAAGATCCTGTACCACCTATAGTTGAAAATAATGGAAGTGTTAATGCAGAGGCTAACATGAGTGAGGCTAAACATAAGAGAGATATAGTACTAGGGAGGAATATTCATACCACTTGCCTCGAAGTTACAGAGCCAGATGCTGATGATGAGATTACTGGGGACAGGGAGGCCTATATGGCAGGTGTTTTGGCTAAATACAGGAAATCTCTGATCGAAAGGACAAAGCATCACTTAGGATATCCTTATAATTTGGATTTCGACTATGGTTCACTTGCTCAGCTTCAgcacttttcaataaataacctGGGTGATCCATTTATTGAAAGCAACTATGGTGTCCACTCACGGCAGTTTGAAGTAGGTGTTTTGGATTGGTTTGCCAGACTGTGGGAGATTGAGAAAGATGAGTACTGGGGCTATATAACAAATTGTGGCACAGAAGGCAATCTCCATGGCATTCTAGTTGGGAGAGAGGTTTTTCCAGATGGAATTCTGTATGCCTCACGGGAAACACATTATTCCATTTTCAAAGCTGCTCGTATGTACAGAATGGAATGTGTGAAAATTGATACCCTCTGTTCTGGGGAGATTGATTGCGACGATTTCAAGGCCAAGATTCTTCTTAACAAGGACAAGCCAGCAATTGTTAATGTCAATATAGGCACCACTGTCAAAGGAGCTGTGGATGACATTGATCTAGTCATTAAGAAACTCGAGGAAGCAGGATTTTCCCAGGATCGATTCTACATCCATTGTGATGGGGCTCTGTTTGGTCTCATGATGCCTTTTGTCAAGCGTGCTCCGAAAGTTTCTTTTAAGAAGCCTATTGGTAGTGTCAGTGTTTCTGGCCACAAATTTGTGGGATGCCCCATGCCTTGTGGTGTTCTGATTACAAGATTAGAGCATATCAATGCTCTCTCCAGAAATGTGGAGTACCTAGCTTCTAGGGATGCCACAATCATGGGCAGCCGTAATGGCCATGCTCCCATCTTCCTCTGGTACACCTTAAACCGAAAAGGATACCGTGGTTTCCAGAAAGAAGTACAGAAATGCTTGAGAAATGCACATTATTTGAAGGACCGCCTCAGAGAAGCCGGGATCGGTGCAATGCTGAATGAGCTGAGCAGCACAGTTGTATTTGAGAGGCCACACGATGAGGAGTTCACTCGCAGGTGGCAATTGGCATGCCAAGGGAACATAGCTCATGTTGTGGTAATGCCCAACATAACCATTGAGAAGCTTGACAAATTTGTAGACGAGCTTGTGCAGAATAGAGCAACGTGGTTTGAAGATGGGAAATGTAAGCCTCACTGTATTGCATCTGATGTAGGTGAAAAGAATTGCCTCTGTGCTTTGCACAAGTGA 1458 0.4294 MVRSNDVMTDELSIAGAVEQLPKDFHLKSVIKDPVPPIVENNGSVNAEANMSEAKHKRDIVLGRNIHTTCLEVTEPDADDEITGDREAYMAGVLAKYRKSLIERTKHHLGYPYNLDFDYGSLAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKDEYWGYITNCGTEGNLHGILVGREVFPDGILYASRETHYSIFKAARMYRMECVKIDTLCSGEIDCDDFKAKILLNKDKPAIVNVNIGTTVKGAVDDIDLVIKKLEEAGFSQDRFYIHCDGALFGLMMPFVKRAPKVSFKKPIGSVSVSGHKFVGCPMPCGVLITRLEHINALSRNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAHYLKDRLREAGIGAMLNELSSTVVFERPHDEEFTRRWQLACQGNIAHVVVMPNITIEKLDKFVDELVQNRATWFEDGKCKPHCIASDVGEKNCLCALHK 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2454 485 SUPERFAMILY PLP-dependent transferases 103 454 IPR015424 -
Sto13g2454 485 PANTHER - 1 485 - -
Sto13g2454 485 Gene3D - 124 367 IPR015421 GO:0003824
Sto13g2454 485 PANTHER SERINE DECARBOXYLASE 1 485 - -
Sto13g2454 485 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 309 330 IPR021115 GO:0016831
Sto13g2454 485 Pfam Pyridoxal-dependent decarboxylase conserved domain 195 407 IPR002129 GO:0016830|GO:0019752|GO:0030170
Sto13g2454 485 Gene3D Aspartate Aminotransferase, domain 1 368 456 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2454 Sto-Chr13 30923475 30925754 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2454 208 391 Calmodulin-binding Proteins AT1G65960 26.943 2.17e-11 63.5