Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2453 ATGGTCAAAAGTAATGGTGTTGTGGCTGAAGAGTTGAGTATCACGGGAGCAGTTGAACCATTGCCAGAGGATTTTGATCTAATATCTGTGATTAAAGATTCTGTACCACCTATAGTTGAAAACAATGGGAGTGTTAATGCAGAGGCTAAGATGAGTGAGGATAAACATAAGAGAGATATAGTACTAGGAAGGAATATTCATACCAGTTGCCTAGAAGTTACAGAGCCAGATGCTGATGATGAGATTACTGGAGACAGGGAAGCTTATATGGCAAGTGTGTTGGCTAGATACAGAAAATCTCTGATCGAAAGGACAAAGCATCATTTAGGCTATCCTTATAATTTGGATTTCGACTATGGTGCACTTGCCCAGCTGCAGCACTTTTCAATAAACAACCTGGGAGATCCATTTATTGAAAGCAACTATGGTGTCCACTCACGGCAGTTCGAAGTTGGTGTTTTGGATTGGTTTGCCAGATTGTGGGAGATTGAGAAAGATGAGTACTGGGGCTATATAACAAATTGTGGCACAGAAGGCAACCTCCATGGCATTCTAGTTGGGAGAGAGGTTTTTCCAGATGGAATTCTGTATGCCTCACGGGAAACACATTATTCCATTTTCAAAGCTGCCCGAATGTACAGAATGGAATGTGTGAAAATTGACACACACTGTTCTGGAGAGATTGATTGTGATGATTTCAAGGCCAAGATTCTTCTTAACAAGGACAAGCCAGCAATTGTTAATGTGAATATAGGCACCACTGTCAAAGGAGCCGTGGATGATCTTGATCTAGTCATCAAGAAACTCGAGGAAGCAGGATTCTCCCACGACCGATTCTACATCCATTGTGACGGGGCTCTGTTTGGTCTCATGATGCCTTTTGTTAAGCGTGCTCCAAAAGTTTCTTTTAAGAAGCCTATTGGCAGTGTTAGTGTTTCTGGCCACAAATTTGTTGGCAGCCGTAATGGCCATGCTCCCATCTTCCTCTGGTACACCTTAAACCGAAAAGGATACTGGGGTTTCCAGAAAGAAGTACAAAAATGCTTGCGAAATGCACATTACTTGAAGGACCGCCTCAGAGAAGCCGGGATCGGTGCAATGCTCAATGAGCTGAGCAGCACAGTTGTATTTGAGCGGCCACATGATGAGGAGTTCACTCGCAGATGGCAATTGGCTTGCCAGGGAAACATAGCTCATGTTGTGGTGATGCCCAACATAACCATTGAGAAGCTTGACAAATTTCTAGACGAGCTTGTGCAGAATCGAGCAACATGGTTTAAAGACGGGAAATGTAAGCCTCACTGCATTGCATCTGATGTAGGTGAAAATAATTGCCTCTGTGCCTTGCACAAGTGA 1356 0.4344 MVKSNGVVAEELSITGAVEPLPEDFDLISVIKDSVPPIVENNGSVNAEAKMSEDKHKRDIVLGRNIHTSCLEVTEPDADDEITGDREAYMASVLARYRKSLIERTKHHLGYPYNLDFDYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKDEYWGYITNCGTEGNLHGILVGREVFPDGILYASRETHYSIFKAARMYRMECVKIDTHCSGEIDCDDFKAKILLNKDKPAIVNVNIGTTVKGAVDDLDLVIKKLEEAGFSHDRFYIHCDGALFGLMMPFVKRAPKVSFKKPIGSVSVSGHKFVGSRNGHAPIFLWYTLNRKGYWGFQKEVQKCLRNAHYLKDRLREAGIGAMLNELSSTVVFERPHDEEFTRRWQLACQGNIAHVVVMPNITIEKLDKFLDELVQNRATWFKDGKCKPHCIASDVGENNCLCALHK 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2453 451 Pfam Pyridoxal-dependent decarboxylase conserved domain 195 320 IPR002129 GO:0016830|GO:0019752|GO:0030170
Sto13g2453 451 PANTHER - 1 319 - -
Sto13g2453 451 PANTHER - 318 451 - -
Sto13g2453 451 Gene3D Aspartate Aminotransferase, domain 1 334 422 IPR015422 GO:0003824
Sto13g2453 451 SUPERFAMILY PLP-dependent transferases 101 421 IPR015424 -
Sto13g2453 451 Gene3D - 124 333 IPR015421 GO:0003824
Sto13g2453 451 PANTHER SERINE DECARBOXYLASE 1 319 - -
Sto13g2453 451 PANTHER SERINE DECARBOXYLASE 318 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2453 Sto-Chr13 30917663 30919691 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2453 208 357 Calmodulin-binding Proteins AT1G65960 23.834 3.86e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2453 K25193 - gmx:100795577 780.015