Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2452 ATGATGGGCGTGGGAGCCGTCCGCAAGGACGTCAAGACCATGATCCTCACCGGAGTCGCCGGCTTGGTGGCCGGCGCGTGTAGCATGGCCATCGGGGAGTTCGTGTCCGTCTACTCCCAGTACGACATGGAGTTGGCTCAGCTGGTAAGAGAAGGCAGTGATGAGTCCGACAAAGACAAGTTGCCCAACCCCTTCCACGCTGCAGTCGCCTCCGCCCTCGCCTTCGCGGTGGGGGCCGCGGTGCCGCTGCTGGGGGCGGCGTTTGTGAGGGATTATAAGGTGAGGTTAGGGGTGGTGGTGGGGGTGGTGAGCGTGGCCTTGTTGGTGTTTGGGGGTTTGAGTGCAGTTCTAGGAAAAGCTCCAATGGTGAAGTCATGTTTGAGGGTTTTGATTGGAGGATGGTTGGCCATGGGGCTTActtttggcttgacaaagtgTGTGGATTATGTTGGGGTATGA 459 0.5664 MMGVGAVRKDVKTMILTGVAGLVAGACSMAIGEFVSVYSQYDMELAQLVREGSDESDKDKLPNPFHAAVASALAFAVGAAVPLLGAAFVRDYKVRLGVVVGVVSVALLVFGGLSAVLGKAPMVKSCLRVLIGGWLAMGLTFGLTKCVDYVGV 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2452 152 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 1 148 IPR008217 GO:0005384|GO:0030026
Sto13g2452 152 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 1-RELATED 1 148 - -
Sto13g2452 152 Pfam VIT family 51 144 IPR008217 GO:0005384|GO:0030026
Sto13g2452 152 Pfam VIT family 1 54 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2452 Sto-Chr13 30913248 30913706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2452 1 147 Nodulin-like Gene Family AT3G43660 69.388 1.01e-71 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2452 K22736 - gmx:121175311 208.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2452 13 30913248 30913706 Sto13g2452 13 30913248 30913706 ECH