Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2445 atgaaggattTAAGTAGGGTGTTGAATGGGTTGAAACCAGCTATGCTAATGGTGTTGGTGGAGACAGCATTTGCAACGAAACAAGAGACCAAAGCTGACTTGGAGGGTGCTTTTCTTCGCCTTTCTTTCTGGGGGAGTTTATTTCAAAATCTGTTCTATGAGGCTCTAGCTTTGACATCGGCAACATTTGTTTCAGCGCTCTTTGATCTGGTTCCTGCCATCACCTTCATCATGGCCATCTGCTgcggGTTCGAAAGATTGAATCTGGGAGTAGCAGCAGGGAAGGCGAAGGTGTTAGGAACTGTAATGGGGATTGGTGGGGCCATGCTTCTTACTTTCGTCAAAGGTCCAGAAATTCACATTTGGTCCTTCCACATTAACCTTTTGCACCAAAACGCCGCCGTTCAAGCCCCTCTTCCCTCTGATTCTGATCAACACAGGTTGATAGGTGTTCTCTGTGCCGTAGCAAGCTGCTTCTCCTATGCTTTATGGCTCATCATTCAGGCTAAGATGAGTGCAGAATACCCAAGCCACTTGTCGAGCACAGCTTTGATGTCAGCAATGGGAGCAATTCAAGGCACTGTGTTTGCTCTTTGCATTGAGGGATCAGATTGGAGCCAATGGAAGTTGGGTTGGGATGTTAGGCTTCTTGCTGTTTCTTTCTCGGGAATTGTGGCGTCTGGAATAATGTTTGTTGTGATAGCATGGTGTGTGAGGATGAAAGGCCCACTCTTTGCTTCTGTATTCAACCCTCTAATGCTCGTGTTTGTGGCCTTTGCTTCTCCCTTGATGTTAAATGAGAATCTCTATCTAGGAAGcgTGGTTGGAGCTTTGCTCATTGTGTGTGGATTGTACATAGTGCTATGGGAAGAAGTTACTCTTGGGTTAGATTACTCTGATTTTGAAGCCCAGTCTGTATCTAAACTTgcagtttttttcttaaatataacaGCAATACCCAAAGCCCAACGCAGCACAAGAGCTTCTGGCAGGCAGGGATCATCAGGAGCGAGCGTTTTTGAGGCAGCGACTAGCACAAGGTTACCTAGCAGCATCAGTGTTAAACTTAATCGAACCAGACTGAGGCGGACACCAAACTGCAGTGGTAGATGCATTAGTAATTGGGATACTGACATTCGCTTCTCTGAACTCATTATAAAGCCGCAACGCATGAGACAAAGATTCCTCCAAAGGAATACACTTTTGCTCCAAGACAAGGGCATTGCGACGCTGCCAAATGGTCCAACAAATCATCGCAATTAA 1263 0.4458 MKDLSRVLNGLKPAMLMVLVETAFATKQETKADLEGAFLRLSFWGSLFQNLFYEALALTSATFVSALFDLVPAITFIMAICCGFERLNLGVAAGKAKVLGTVMGIGGAMLLTFVKGPEIHIWSFHINLLHQNAAVQAPLPSDSDQHRLIGVLCAVASCFSYALWLIIQAKMSAEYPSHLSSTALMSAMGAIQGTVFALCIEGSDWSQWKLGWDVRLLAVSFSGIVASGIMFVVIAWCVRMKGPLFASVFNPLMLVFVAFASPLMLNENLYLGSVVGALLIVCGLYIVLWEEVTLGLDYSDFEAQSVSKLAVFFLNITAIPKAQRSTRASGRQGSSGASVFEAATSTRLPSSISVKLNRTRLRRTPNCSGRCISNWDTDIRFSELIIKPQRMRQRFLQRNTLLLQDKGIATLPNGPTNHRN 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2445 420 PANTHER WAT1-RELATED PROTEIN 17 290 IPR030184 GO:0016021|GO:0022857
Sto13g2445 420 SUPERFAMILY Multidrug resistance efflux transporter EmrE 205 290 - -
Sto13g2445 420 Pfam EamA-like transporter family 149 288 IPR000620 GO:0016020|GO:0016021
Sto13g2445 420 PANTHER WAT1-RELATED PROTEIN 17 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2445 Sto-Chr13 30838732 30842972 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2445 45 289 Nodulin-like Gene Family AT1G25270 41.700 3.85e-59 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2445 - - gmx:100798755 367.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2445 13 30838732 30842972 Sto13g2443 13 30810225 30817482 CCT
Sto13g2445 13 30838732 30842972 Sto13g2446 13 30860550 30864265 CCT