Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2438 ATGGCGTCGTCGAAGGTTGCGACGGCGAGTCCGGATCTGCCACGCCAATCTTCCCTTTCTTCCATTCTCGCCGATCTTTCCAAGACCTCGCAGTCCATGAGCATGGATGACCTCCTCAAGTTCATCTACAATTCCTCCGAACCACAACCCGACCCGTCTTCTCACATCCACGCCGCTTCAATTTCCCGCCAGGGGAGCCTCTCGCTTCCTAAGGAGATGGCCGCCAAGACGGTGGACGAGGTTTGGAAGGAGATCGTGGAGGGGACTGATCCGAGACGGGTGGGCCCAGGGGACGAGGAGATGACTCTCGAGGATTTCTTGACCAAGGCTGGAGCAGTCAGAGAGGACGATGTCCGAGGGGTTCCACCCGTCGCGGCGGCCACCGGCGCAGGGAGCCACCGTGCAGACGTGGTGGCGATTGACGGTGGTGGTGCTCAGTTTCCGATGACCTCCGTGGAGGCTTTTGAGAACGTAATCGAGGGGCCGGTTGTAGCAGCGGAAGTAGAAGTATCGAGAAGGGGAAAGAGGAGGGCAAAAGAGGAACCCATGGACAACGCCACGCTTCAGAAACAGAGAAGAATGATAAAAAACAGAGAGTCCGCGGCCAGGTCCAGAGAACGGAAGcagGCTTACACTGTTGAGCTAGAGGCTCTAGTTTCGCAGCTGGAGGAAGAGAAGGCACGATTATTGAAGGAAGAGGCTGATAAAAACAAGGAGAGGTTCAAGCAGCTCATGGAATATCTTATTCCAGTTGTTGAGAAGCATAGCCCTAGACCTCGAAGCATGCATCGGAGAATTAATTCGGTTTAG 810 0.5494 MASSKVATASPDLPRQSSLSSILADLSKTSQSMSMDDLLKFIYNSSEPQPDPSSHIHAASISRQGSLSLPKEMAAKTVDEVWKEIVEGTDPRRVGPGDEEMTLEDFLTKAGAVREDDVRGVPPVAAATGAGSHRADVVAIDGGGAQFPMTSVEAFENVIEGPVVAAEVEVSRRGKRRAKEEPMDNATLQKQRRMIKNRESAARSRERKQAYTVELEALVSQLEEEKARLLKEEADKNKERFKQLMEYLIPVVEKHSPRPRSMHRRINSV 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2438 269 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 3 269 IPR043452 GO:0003700|GO:0045893
Sto13g2438 269 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 192 207 IPR004827 GO:0003700|GO:0006355
Sto13g2438 269 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 187 239 IPR004827 GO:0003700|GO:0006355
Sto13g2438 269 PANTHER OS05G0437700 PROTEIN 3 269 - -
Sto13g2438 269 CDD bZIP_plant_BZIP46 189 231 - -
Sto13g2438 269 SUPERFAMILY Leucine zipper domain 189 239 IPR046347 GO:0003700|GO:0006355
Sto13g2438 269 Pfam bZIP transcription factor 186 244 IPR004827 GO:0003700|GO:0006355
Sto13g2438 269 MobiDBLite consensus disorder prediction 172 207 - -
Sto13g2438 269 Gene3D - 188 244 - -
Sto13g2438 269 Coils Coil 208 240 - -
Sto13g2438 269 SMART brlzneu 185 249 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2438 Sto-Chr13 30778468 30780723 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2438 29 269 bZIP Transcription Factor Family AT5G44080 39.636 9.15e-40 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sto13g2438 bZIP_1 2.1e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2438 K14432 - tcc:18607377 251.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2438 13 30778468 30780723 Sto13g2438 13 30778468 30780723 ECH