Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2436 ATGTCTCACAGGAAGTTTGAGCACCCAAGACATGGATCACTTGGCTTTCTCCCAAGGAAGCGTGCAGCTCGTCACCGTGGAAAGGTGAAGGCTTTCCCAAAGGATGATCCCAGCAAACCATGTGGATTGACTGCTTTCGTAGGTTACAAGGCTGGGATGACCCACATTGTTAGAGAAGTTGAGAAACCTGGATCAAAGCTTCATAAAAAAGAGACCTGTGAAGCTGTCACCATTATTGAAACTCCACCAATGGTTGTTGTTGGAGTTGTTGGTTATGTGAAGACACCCCGTGGTCTTCGCACACTGAATACAGTTTGGGCTCAGCACTTAAGTGAGGAAGTAAGGAGACGATTTTACAAGAACTGGTGCAAGTCTAAAAAGAAGGCATTTACCAAGTATTCAAAGAAATTTGAAACtgaggaaggaaagaaggaTATTCATGCTCAGCttgagaaattgaagaaatatgCATCGGTCATCCGTGTTTTGGCACATACTCAGATAAGGAAGCTGAAGGGTCTAAAGCAAAAGAAGGCACATTTGATGGAGATACAAGTGAATGGAGGAACAATAGCACAGAAGGTTGACTATGCCTATGGGTTCTTTGAAAAGCAAATCCCAGTGGATGCTGTCTTTGGGAAGGATGAGATGATTGACATCATTGGTGTGACCAAGGGTAAAGGATATGAAGGTGTGGTAACTCGATGGGGTGTCACTCGCCTTCCTCGCAAGACACACAGGGGTCTAAGGAAGGTTGCTTGTATTGGTGCATGGCACCCTGCTCGGGTTTCTTTCACAGTTGCCAGGGCTGGCCAGAATGGATATCATCACCGTACTGAGTTGAACAAGAAGGTCTACAAGGTTGGCAAAGCAGGGCAAGAAACACACACTGCTATTACTGAGTTTGACAGCTATTATTTAACAATTGAACAACACTACACTAATGTTTGCGAATGGCAATATTTCAGGACTGAGAAGGATATTACTCCTATGGGTGGATTCCCTCACTATGGTGTGGTAAAGGATGATTATATTATGGTTAGAGGATGCTGCGTAGGACCCAAAAAGAGAGTGGTAACCCTCCGTCAGTCACTTCTGAAGCAGACATCTCGTGTGGCTCTTGAAGAGATCAAACTCAAGTTCATTGACACTTCCTCCAAGTTTGGACATGGTCGCTTCCAGACAACTCAAGAGAAGCAGAAGTTTTATGGTCGCTTGAAGGCTTGA 1227 0.4344 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCGLTAFVGYKAGMTHIVREVEKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRTLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKKFETEEGKKDIHAQLEKLKKYASVIRVLAHTQIRKLKGLKQKKAHLMEIQVNGGTIAQKVDYAYGFFEKQIPVDAVFGKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKVYKVGKAGQETHTAITEFDSYYLTIEQHYTNVCEWQYFRTEKDITPMGGFPHYGVVKDDYIMVRGCCVGPKKRVVTLRQSLLKQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKFYGRLKA 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2436 408 PANTHER 60S RIBOSOMAL PROTEIN L3-LIKE 1 408 - -
Sto13g2436 408 ProSitePatterns Ribosomal protein L3 signature. 212 235 IPR019926 -
Sto13g2436 408 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 1 408 IPR045077 GO:0003735|GO:0005840|GO:0006412
Sto13g2436 408 SUPERFAMILY Translation proteins 4 389 IPR009000 -
Sto13g2436 408 MobiDBLite consensus disorder prediction 1 20 - -
Sto13g2436 408 Gene3D Ribosomal protein L3, domain 3 1 274 IPR044892 -
Sto13g2436 408 Gene3D Translation factors 44 404 - -
Sto13g2436 408 Pfam Ribosomal protein L3 1 304 IPR000597 GO:0003735|GO:0005840|GO:0006412
Sto13g2436 408 Pfam Ribosomal protein L3 317 389 IPR000597 GO:0003735|GO:0005840|GO:0006412
Sto13g2436 408 Gene3D - 83 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2436 Sto-Chr13 30764029 30767378 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2436 1 405 Cytoplasmic Ribosomal Protein Gene Family AT1G61580 83.457 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2436 K02925 - gmx:100782902 729.554