Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2432 ATGGAACAAGAAGCAGATCCTGATCCACCAGAATTAGAcgatgaagaagatgatcatGAAGGATCATCAATGgaGTTAAGTGTGTTACAAAAAGAGACAGATCGcatgaaagaagaaaataaagttttaagGAAAGTGGTGGAGCAAACGATGAAAGACTACTATGATCTACAAATGAAATTCGCAGTCATCCAGCAGAACACCAACAACAAGAAAAAGGATGCGCAGATTTCTCTGTCTCTTGAAAACCATGGAAATCCTGGTGATGATATTGATGATGCAAGTGTAAGAGAGATTGGATTGGGGTTATCACTAAGGTTACACACAAGTAGTGTTACAAgtcaggaagaagaagaaagagaattagaagagaagaagaagaataataataaggaaGAATTGGGAGGGTTTGGATCATCATCGTCACCCAACAACATACCTAGGACTCATCATCATGATTTTCCAGCTGGTTTCAATAATAATGCTCATGTTGCTCCATCACCTCCTAACAATAGAAAGGCTAGGGTTTCTGTCAGAGCAAGATGTGAAGCAGCCACAATGAATGATGGTTGTCAATGGAGAAAATATGGACAAAAAATTGCAAAAGGAAACCCCTGCCCTCGTGCTTATTATCGTTGCACCGTAGCCCCAGGCTGCCCTGTTAGAAAACAGgtGCAAAGATGCCTAGAGGACATGTCCATACTAATCACAACGTATGAAGGAACACACAACCATCCCCTCCCAGTGGGAGCAACTGCTATGGCTTCCACTGCTTCTGCTGCTGCATCCTTCATGTTTCTTGATTCCACCAACCCTACCTCTTCTTCCACTTTCACCCATTCCCACCTTCCTATTCATTACAATTCCAACTTCGCTACCATCAACCCTACTGACCCTTCCAAAGGAATTGTCCTTGATCTAACCTCACCCCCTCCACCGCCCCCTCCATTTTCTTGGATACCAAACACACCATCCATGCCGAACAATTTCCCCTCCAGCGCCGGCACTACCAGTGAGGAAAATCACAAGGGAGTACTACCATTAGgggatcatcatcatcatcatcagagtGTGTCCCAAATTGCCTCAGATCCTAAGTTTAGGGTTGCTGTTGCAGCAGCCATAACCACACTTATTAATAATAAAGAGATGagccataataataataatattcctATAGGGACTTCTTTTGGAGGGGTTGCTCTTGATTGGTTGTGGGTCATAGGTTCATCAGAAGCATTCTGA 1245 0.3896 MEQEADPDPPELDDEEDDHEGSSMELSVLQKETDRMKEENKVLRKVVEQTMKDYYDLQMKFAVIQQNTNNKKKDAQISLSLENHGNPGDDIDDASVREIGLGLSLRLHTSSVTSQEEEERELEEKKKNNNKEELGGFGSSSSPNNIPRTHHHDFPAGFNNNAHVAPSPPNNRKARVSVRARCEAATMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHPLPVGATAMASTASAAASFMFLDSTNPTSSSTFTHSHLPIHYNSNFATINPTDPSKGIVLDLTSPPPPPPPFSWIPNTPSMPNNFPSSAGTTSEENHKGVLPLGDHHHHHQSVSQIASDPKFRVAVAAAITTLINNKEMSHNNNNIPIGTSFGGVALDWLWVIGSSEAF 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2432 414 Coils Coil 26 49 - -
Sto13g2432 414 MobiDBLite consensus disorder prediction 22 39 - -
Sto13g2432 414 ProSiteProfiles WRKY domain profile. 182 248 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto13g2432 414 Pfam WRKY DNA -binding domain 188 246 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto13g2432 414 MobiDBLite consensus disorder prediction 324 361 - -
Sto13g2432 414 MobiDBLite consensus disorder prediction 133 148 - -
Sto13g2432 414 SUPERFAMILY WRKY DNA-binding domain 180 248 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto13g2432 414 Coils Coil 112 135 - -
Sto13g2432 414 MobiDBLite consensus disorder prediction 344 359 - -
Sto13g2432 414 Gene3D WRKY domain 172 249 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto13g2432 414 SMART WRKY_cls 187 247 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto13g2432 414 MobiDBLite consensus disorder prediction 1 21 - -
Sto13g2432 414 MobiDBLite consensus disorder prediction 108 172 - -
Sto13g2432 414 MobiDBLite consensus disorder prediction 112 132 - -
Sto13g2432 414 MobiDBLite consensus disorder prediction 1 39 - -
Sto13g2432 414 MobiDBLite consensus disorder prediction 324 340 - -
Sto13g2432 414 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 11 388 IPR044810 GO:0003700
Sto13g2432 414 PANTHER WRKY TRANSCRIPTION FACTOR 9-RELATED 11 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2432 Sto-Chr13 30732655 30736469 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2432 29 302 WRKY Transcription Factor Family AT1G68150 49.158 3.30e-80 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto13g2432 WRKY 1.5e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2432 13 30732655 30736469 Sto13g2432 13 30732655 30736469 ECH