Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2431 ATGGAGGGCAGCCACCGCAAGCGTAATTCCAAGCCCAAGCTAGAGCGCCGAAACGCCATGAAGAACATCGACTACCAagtctcttcctcctcctcctcctcgacTCGTTCCCTCGACGACGTCGCTTTACTCCGAACTAGCTTCAGGGTGGTGGAAGGCGTGGACGGCGAATTCGACCTTCTTTTCCGCAGTTTAGGGCTCAGTGGGCCTGAAGACTTCGAAATCCCAACTGCTGATTGGGAAGCCCAAAAGGCTAAGAAGCTGCTGGGACATGAAATTTCTGGTGAATTCCACAGTGGGGTTGGGATTAATGGTGATACCGAGCTGAAAGGTGAGAACTTGCGAGCTGGGGTTGGGGTTGGTGGTCATACAGAGTTCAAAAGTGAGAGCTTTCAATCCAGGGAAGAGAGGAAGATtgatgtttcttcttcttcttctaattcTAGGGCTTCAGGGTCTAATGGGGGTGGTGGAGGAATCAAGGGTGTTCGGCCTCCTGTTCTTTCGCCGCCGCCGGCGATGTTGCGGCCAATTGTTGATCATGATGTGAGCTCCACTTGGGATATAGTGAGGTCTTTTGCTCCccaagatgaagatgaagatgaaaatgagGAGGTTGTCAGAGAGGAAAGCAATCTTGTATCAGATTCTGGTTCATCTGTAtcccatgatgatgatgatgatgaaaatgaTGATAAGAATGCTGGTGTGGTTGAGGATTCAGTTTATAATGTGTCACCAAGTGGATCTTTAAGACGCACTTTCTCCTCTTGGCAAAAAGGAGATATTCTTGGAAAGGGGTCATTTGGAACGGTGTATGAAGGCTTTACAAGTGACGGatttttttttgctgtcaaggAGGTGTCTTTGCTCGATCAAGGAAGCCAGGGAAAACAGAGCATTTTCCAACTTCAGCAGGAAATATCTCTGTTGAGTCAGTTTGAACATGAAAACATAGTACGATATTTTGGCACAGACAAGGACAATAGTACACTATATATCTTCCTTGAGCTTATGACAAAAGGATCATTGGCAAATCTATATCAAAAGTATCGATTAAGGGATCCTCAAGTTTCTGCATATACACGGCAGATTTTAAGCGGGTTGAAGTATCTTCACGATCAAAATGTGGTTCACAGGGACATCAAGTGTGGTAATATATTGGTTGATGCAAGTGGGTCAGTAAAACTTGCAGATTTTGGATTGGCAAAGGCAACCAAATTGAATGATGTTAAATCAAGCAAAGGCTCCCCTTACTGGATGGCCCCTGAGGTTGTTAATTTGAGGAGCCGTGGTTATGGACTAAAAGCCGATATATGGAGCCTAGGATGTACAGTTTTGGAGATGTTGACGCGGCAGCCTCCTTATTCTCAGTTGGAAGGAATGCAAGCATTATTCCGGATTGGCCGGGGTGAACCTCCACCCATTCCCGAGTCAATATCGAAGGATGCCCGGGATTTTATTCATAAATGCTTACAAGTTAATCCAAATAAACGCCCAACTGCAGCTCAGTTGTTGGAACATCCATTTGTAAAGAGACCACCTCAAACGCCATTGAGTCCTGCTTCGCCACttgttattaataattttcagTCTTGA 1599 0.4196 MEGSHRKRNSKPKLERRNAMKNIDYQVSSSSSSSTRSLDDVALLRTSFRVVEGVDGEFDLLFRSLGLSGPEDFEIPTADWEAQKAKKLLGHEISGEFHSGVGINGDTELKGENLRAGVGVGGHTEFKSESFQSREERKIDVSSSSSNSRASGSNGGGGGIKGVRPPVLSPPPAMLRPIVDHDVSSTWDIVRSFAPQDEDEDENEEVVREESNLVSDSGSSVSHDDDDDENDDKNAGVVEDSVYNVSPSGSLRRTFSSWQKGDILGKGSFGTVYEGFTSDGFFFAVKEVSLLDQGSQGKQSIFQLQQEISLLSQFEHENIVRYFGTDKDNSTLYIFLELMTKGSLANLYQKYRLRDPQVSAYTRQILSGLKYLHDQNVVHRDIKCGNILVDASGSVKLADFGLAKATKLNDVKSSKGSPYWMAPEVVNLRSRGYGLKADIWSLGCTVLEMLTRQPPYSQLEGMQALFRIGRGEPPPIPESISKDARDFIHKCLQVNPNKRPTAAQLLEHPFVKRPPQTPLSPASPLVINNFQS 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2431 532 ProSitePatterns Serine/Threonine protein kinases active-site signature. 377 389 IPR008271 GO:0004672|GO:0006468
Sto13g2431 532 MobiDBLite consensus disorder prediction 22 39 - -
Sto13g2431 532 MobiDBLite consensus disorder prediction 128 142 - -
Sto13g2431 532 MobiDBLite consensus disorder prediction 1 20 - -
Sto13g2431 532 SMART serkin_6 258 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2431 532 ProSiteProfiles Protein kinase domain profile. 258 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2431 532 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 156 514 - -
Sto13g2431 532 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 4 143 - -
Sto13g2431 532 Gene3D Transferase(Phosphotransferase) domain 1 256 525 - -
Sto13g2431 532 SUPERFAMILY Protein kinase-like (PK-like) 240 527 IPR011009 -
Sto13g2431 532 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 4 143 - -
Sto13g2431 532 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 156 514 - -
Sto13g2431 532 MobiDBLite consensus disorder prediction 118 177 - -
Sto13g2431 532 Pfam Protein kinase domain 259 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2431 532 MobiDBLite consensus disorder prediction 193 241 - -
Sto13g2431 532 ProSitePatterns Protein kinases ATP-binding region signature. 264 286 IPR017441 GO:0005524
Sto13g2431 532 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2431 Sto-Chr13 30723965 30728712 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2431 13 514 MAP Kinase Kinase Kinase AT4G08500 49.301 9.13e-156 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Sto13g2431 Pkinase 2.2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2431 - K13414 jre:109013413 575.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2431 13 30723965 30728712 Sto13g2431 13 30723965 30728712 CCT
Sto13g2431 13 30723965 30728712 Sto13g2431 13 30723965 30728712 ECH