Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2396 ATGGAGAGAAATCTGAGTTCTTATAGTCTTCATCACTTGACCTCTAGCTTGAAGAAGAGTGAGCACAAACACAAGAATGGCAACTCAGAGAAGTCTCATCACCTTGAAAAAGAAGGCCATATGTCTCCATCTTTTGATCTACAGAATGTCTCAAAGCTCATTCTCCCACCACTTGGTGTTTCTAGTTTCAACCAGAACCCAGTAGGCTCAAAAGGGTGGATCATATCTCCAATGAATTCAAGATACAGGTGGTGGCAGAGTTTTATGGTGGTTCTGGTAGGCTATTCGGCATGGGTTTATCCTTTTGAAGTTGCTTTCCTACACTCAACTCCAAACAGGGCAGTGTTGATTGTGGACAATGTTGTTGATATTTTCTTTGCTGTTGATATTGTTCTCACTTTCTTCATAGCTTTCATTGATCCAACCACTCAACTACTAGTTCGAGATTCCAAGAAGATTGCTATGAGGTACCTATCATCATGGTTCATGATGGATGTAGTATCAACTATTCCATACGAGACATTGGGACTTTTGATCACAGGCAAACACAGAGTGAGCTTTGTTTTCTACCTTTTGGGAATGCTTAGATTTTGGAGACTCAGAAGAGTGAAGCAATACTTCACCAGAGGCTTTCAATATCTTTTGGCAGGCTTGAGAAAGACATCAGTTCACTGTGCTGGATGCCTATACTACCTACTAGCTGATAGGTATCCTCACCAAGGAAAGACATGGATAGGGGCAGTGATACCAAATTTTAGAGAGACAAGCCTTTGGATCAGATACATCTCCGCCATGTACTGGTCCATCACCACCATGACCACCGTGGGATACGGCGACCTCCACGCCGTGAACACCGTGGAAATGATATTCATCATCTTCTACATGCTCTTCAACCTTGGCCTCACTGCTTACTTGATTGGTAACATGACCAATCTTGTTGTTGAAGGCACTCGCCGTACCATGGAATTTAGAAATAGCATTGAAGCTGCATCGAATTTCGTGTGCCGGAATCGATTGCCTCCGAGGTTGAAAGAGCAGATTCTTGCCTATATGTGTCTGAGATTTAAGGCTGAGAGCTTGAACCAGCATCAGCTTATTGAACATCTACCAAAATCCATTTGCACAACCATCTGCCAGCATTTGTTTTTCCCAACTGTGGAGAAAGTCTATCTTTTTAAAGATGTCTCCAGAGAAATTCTCTTGTTTTTGGTAGCAAAAATGAAGGCAGAGTATTTACCTCCTAGAGAGGATGTTATCCTGCAAAATGAAGCACCAGATGATGTATACATTATAGTGTCAGGAGAAGTGGAGATCATTGATTGTGAAATGGAGAAAGAGAAAGTGTTGGGGACATTACTAGCAGGGGACATGTTTGGAGAAGTTGGAGCACTTTGCTGCAAACCTCAGAGCTTTACCTTCAGAACCAAGACTCTCACACAGCTCTTGAGGCTCAAAACCAATGCTCTTATAGAAGCAATGCAGACCAAAAAAGAGGACAATATACTGATTCTCAAGAATTTCCTTCAGCATTTTAAGCAACTGAAGGATCTGAGTATTAAAGATCTAATGGTGGAGAGTGGAGAACAAGAGGACCCAAACATGGCTGTGAACTTGCTAACTGTGGCTAGTACAGGAAATGCTGCTTTTCTTGAAGAGCTTCTCAAGGCAGGTTTGGATCCTGACGTTGGAGACTCAAAAGGGAGAACCCCATTGCACATAGCAGCAACAAATGGGCATGAAGAGTGTGTAAAAGTCTTGCTTAGGCATGCATGCAACATACATATAAAAGATGTCAATGGTAACACTGCATTATGGGATGCCATAGCATCAAAGCACCACTCCATATTCAGGATCCTCTACCAACTTTCTTGCCTGGCTGATCCACAAACAGGAGGTGATCTCCTGTGTGCTGCATCAAAAAGAAATGATTTAGCAGTGATGAATGATCTCTTGAAGCAAGGATTGAACATAGACTCCAAGGATCGCCATGGAGTCACAGCAATCCAAATAGCCATGGCAGAGAACCATGTAGAAATGGCTCAGCTGCTTGTCATGAATGGAGCAGATGTTTCTGGCatagcacacacacacaatttCTCTGCTTCTGCTTTGAATGAAATGCTGCAAGATCGCGAGACGGGGCATCGGATCACGGTACATGATGAGGCGGCCACACATTGTGATTTTGTGCCAATGGGACATGATggagatgatggtgatgatgaacaGGAGGAGCAGAGTTGGGGAAGATGTAATGGATCAAAGTTTCCAAGAGTGAGCATCTATAGAGGTCACCCtatgaagagaagagagaaatgtAGCAAGGAAGCTGGGAAGCTCATAAGATTTCCTAATTCACTTGAGGAGCTCAAGATCATTGCAGGTGAAAAGTTTGGGTTCGAAGCAAAAGATGCAATGGTGACAAATGAAGAAGGAGCAGAAATAGACTGTATTGATGTGATCAGAGACAATGATAAACTTTTTATTGTTGAATAA 2496 0.4167 MERNLSSYSLHHLTSSLKKSEHKHKNGNSEKSHHLEKEGHMSPSFDLQNVSKLILPPLGVSSFNQNPVGSKGWIISPMNSRYRWWQSFMVVLVGYSAWVYPFEVAFLHSTPNRAVLIVDNVVDIFFAVDIVLTFFIAFIDPTTQLLVRDSKKIAMRYLSSWFMMDVVSTIPYETLGLLITGKHRVSFVFYLLGMLRFWRLRRVKQYFTRGFQYLLAGLRKTSVHCAGCLYYLLADRYPHQGKTWIGAVIPNFRETSLWIRYISAMYWSITTMTTVGYGDLHAVNTVEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVCRNRLPPRLKEQILAYMCLRFKAESLNQHQLIEHLPKSICTTICQHLFFPTVEKVYLFKDVSREILLFLVAKMKAEYLPPREDVILQNEAPDDVYIIVSGEVEIIDCEMEKEKVLGTLLAGDMFGEVGALCCKPQSFTFRTKTLTQLLRLKTNALIEAMQTKKEDNILILKNFLQHFKQLKDLSIKDLMVESGEQEDPNMAVNLLTVASTGNAAFLEELLKAGLDPDVGDSKGRTPLHIAATNGHEECVKVLLRHACNIHIKDVNGNTALWDAIASKHHSIFRILYQLSCLADPQTGGDLLCAASKRNDLAVMNDLLKQGLNIDSKDRHGVTAIQIAMAENHVEMAQLLVMNGADVSGIAHTHNFSASALNEMLQDRETGHRITVHDEAATHCDFVPMGHDGDDGDDEQEEQSWGRCNGSKFPRVSIYRGHPMKRREKCSKEAGKLIRFPNSLEELKIIAGEKFGFEAKDAMVTNEEGAEIDCIDVIRDNDKLFIVE 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2396 831 MobiDBLite consensus disorder prediction 19 42 - -
Sto13g2396 831 ProSiteProfiles KHA domain profile. 758 831 IPR021789 -
Sto13g2396 831 CDD CAP_ED 391 495 IPR000595 -
Sto13g2396 831 ProSiteProfiles Ankyrin repeat region circular profile. 663 691 - -
Sto13g2396 831 MobiDBLite consensus disorder prediction 20 41 - -
Sto13g2396 831 Pfam KHA, dimerisation domain of potassium ion channel 757 829 IPR021789 -
Sto13g2396 831 SMART cnmp_10 391 508 IPR000595 -
Sto13g2396 831 ProSiteProfiles Ankyrin repeat profile. 566 598 IPR002110 GO:0005515
Sto13g2396 831 PANTHER POTASSIUM CHANNEL AKT1 32 831 IPR045319 GO:0005249|GO:0006813
Sto13g2396 831 Gene3D - 626 714 IPR036770 -
Sto13g2396 831 SUPERFAMILY Voltage-gated potassium channels 77 314 - -
Sto13g2396 831 Gene3D - 535 622 IPR036770 -
Sto13g2396 831 SMART ANK_2a 630 659 IPR002110 GO:0005515
Sto13g2396 831 SMART ANK_2a 533 562 IPR002110 GO:0005515
Sto13g2396 831 SMART ANK_2a 599 628 IPR002110 GO:0005515
Sto13g2396 831 SMART ANK_2a 566 595 IPR002110 GO:0005515
Sto13g2396 831 SMART ANK_2a 663 692 IPR002110 GO:0005515
Sto13g2396 831 ProSiteProfiles Ankyrin repeat region circular profile. 566 597 - -
Sto13g2396 831 ProSiteProfiles cAMP/cGMP binding motif profile. 391 510 IPR000595 -
Sto13g2396 831 ProSiteProfiles Ankyrin repeat profile. 663 695 IPR002110 GO:0005515
Sto13g2396 831 Pfam Ankyrin repeats (3 copies) 542 621 IPR002110 GO:0005515
Sto13g2396 831 Gene3D - 84 314 - -
Sto13g2396 831 PANTHER POTASSIUM CHANNEL AKT2/3-LIKE 32 831 - -
Sto13g2396 831 Gene3D Jelly Rolls 358 532 IPR014710 -
Sto13g2396 831 Pfam Ion transport protein 82 320 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Sto13g2396 831 PRINTS Ankyrin repeat signature 567 582 IPR002110 GO:0005515
Sto13g2396 831 PRINTS Ankyrin repeat signature 679 693 IPR002110 GO:0005515
Sto13g2396 831 PRINTS EAG/ELK/ERG potassium channel family signature 119 129 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto13g2396 831 PRINTS EAG/ELK/ERG potassium channel family signature 130 139 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto13g2396 831 PRINTS EAG/ELK/ERG potassium channel family signature 261 278 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto13g2396 831 PRINTS EAG/ELK/ERG potassium channel family signature 287 298 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto13g2396 831 PRINTS EAG/ELK/ERG potassium channel family signature 305 314 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto13g2396 831 Pfam Cyclic nucleotide-binding domain 411 495 IPR000595 -
Sto13g2396 831 SUPERFAMILY Ankyrin repeat 536 691 IPR036770 -
Sto13g2396 831 SUPERFAMILY cAMP-binding domain-like 318 509 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2396 Sto-Chr13 30412061 30420271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2396 8 571 Ion Channels AT4G22200 68.385 0.0 800
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2396 K21867 - gmx:100798422 1250.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2396 13 30412061 30420271 Sto13g2396 13 30412061 30420271 ECH