Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2386 ATGATTTATGTTCATGCCAAAGGAATGATAGTTGATGATCAATTTGTTTTGATGGGATCTGCAAATATTAACCAAAGGTCTTTGGACGGTTCAAGGGACACTGAAATTGCTATGGGTGCTTATCAGCCAAAATACACATGGGCAGGAAAGAAATCTCATCCACATGGCCAGGTGTATGGTTACAGAATGTCACTGTGGGCTGAACACCTTAGTGGTATTGAGGATAGTTTCAAGGAACCACAAAGCCTTGAATGTGTGAGACGTGTGAATGAAATTGCCAAGAGTAACTGGAAGGCGTTCGTATGTGAGGAAGGGAAGGAGTTGAAGGGACACCTGATGCAGTATCCAGTTGAGGTTAGTAAGGATGGAAAAGTCAGTGCACTCAAAGATTGGGAACACTTCCCTGATTTTGGTGGTAAAATTCTTGGATCACCCAACTCTCTTCCTGATACACTAACCACATAA 465 0.4237 MIYVHAKGMIVDDQFVLMGSANINQRSLDGSRDTEIAMGAYQPKYTWAGKKSHPHGQVYGYRMSLWAEHLSGIEDSFKEPQSLECVRRVNEIAKSNWKAFVCEEGKELKGHLMQYPVEVSKDGKVSALKDWEHFPDFGGKILGSPNSLPDTLTT 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2386 154 PANTHER PHOSPHOLIPASE D 1 153 - -
Sto13g2386 154 PANTHER PHOSPHOLIPASE D 1 153 IPR015679 -
Sto13g2386 154 SUPERFAMILY Phospholipase D/nuclease 2 85 - -
Sto13g2386 154 Pfam Phospholipase D C terminal 74 144 IPR024632 -
Sto13g2386 154 SMART pld_4 1 27 IPR001736 GO:0003824
Sto13g2386 154 Gene3D Endonuclease Chain A 2 90 - -
Sto13g2386 154 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 1 27 IPR001736 GO:0003824
Sto13g2386 154 Pfam PLD-like domain 4 36 IPR025202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2386 Sto-Chr13 30335449 30336008 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2386 1 153 Phospholipase D Gene Family (Wang group) AT4G11850 62.745 1.99e-67 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2386 K01115 - qsu:111997574 258.84