Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2384 ATGACTTCCCTTTCGTTTTTCCCATGCTCCGTCTatgttgttttgtgttttagttTTGTTACTGTTTTGTGGCTCAACAGCTGTGTGTTTCTAGGCCATGCCTTCCATTTTGCTGCACTTAAACTTCTTGGTGTTGAGGAAGATAATACAGATGTTGATGATAAAAAAGTGGTTGATGATAAGGAACATATGTATTTACCATCATCTGATTCTTATGGCAGCAAGAGCAAAAAGAAATCTGGTTCTGGGGACCAGCAACAAGATCACTATGCATTGTTGGGTTTGGGCCATCTAAGATATCTTGCTACGGAAGATCAAATACGTAAAAGCTATCGAGAAACTGCCTTGAGGTATCATCCTGACAAACAGGCTTCTCTACTTCTTGCTGAGGAGACTGAAGCTGCAAAGCAAGCAAAGAAGGATGAGATAGAAAGTCATTTTAAGGCAATACAGGAAGCATATGAGGTGTTGATTGATCCTGTGAAGAGAAGAAATTATGATTCCACAGATGAGTTTGATGATGAGATTCCCACTGACTGTGCCCCACAAGACTTTTTCAAGGTGTTTGGTCCTGCTTTTATGAGGAACGGAAGGTGGTCGGTTAATCAACCAATTCCATCTTTTGGTCATAATGATACTCCACTAAAAGAAGTTGATAATTTCTACAATTTCTGGTACACGTTTAAAAGCTGGAGGGAATTTCCTCATGCTGATGAATTTGATCTTGAACAAGCTGAATCTCGAGACCATAGGAGGTGGATGGAAAGGCAGAATGCAAAATTGTCAGAAAAAGCTAGGAAGGAAGAATCTGCACGGATACGTACTCTTGTGGATAATGCTTATAAGAGAGACCCTAGAATATTGAGGAGGAAGGAAGAGGAAAAAGCTGAGAAGCAAAGGAAAAAGGAGGCTAAATTTCTTGCAAAGAAGCTGCAGGAAGAAGAAGCTGCTAGAATTGCTGAAGAGGAGAGGCGAcgaaaggaggaggaagataaACGAGCTGCAGAAGCTGCTTTACAACAGAAGAAGGTaaaggagaaagagaaaaagctCTTGCGAAAAGAGCGTGCTCGTCTTCGAACACTTTCAGTACCTATTTTGTCACAACAGCTACATGATATATCTGAGGATGATGTAGAAAATCTATGCATGACACTTGATATTGAGCATTTGAGGAGTTTGTGTGACAATTTGGATGGCAAGCAGGCGTTAGAGCAAGCAAAAATTCTCCGAGATGCCCATGGTTGCAAGAAAGATGTGGATAATAAGAAAGATGAGACAACTGATCGACAGAATGGTTCTGTACGGGCTAATGGTAGTAGTAGTGCCTCACCAGGCAACttagagaagaaggagaaaccttgGAGTAAGGAAGAGATTGAACTATTGAGAAAAGGAATGCAAAAATATCCCAAAGGAACTTCACGTAGGTGGGAGGTGATTTCTGAGTACATTGGTACTGGAAGATCCGTGGAGGAAATTATGAAGGCAACGAAAACAGTTCTCCTCCAGAAGCCTGATTCTTCCAAATCTTTTGATGCATTTCTTGAGAAAAGGAAACCTGCACAATCTATTGCGTCTCCGCTCACAACCAGAGAAGAATTAGAAGGGAAACCAACTCCCGGAAGACCTGAAAATAATGCTGCCTCAACTGCAAATAACTTGGAAGACTCGAGCAGCGAAAGTTCTGACAACCAGAACTCCCTCGGTTCGGTTGCTGCAAATGGAGTATCCTCTAGTTCGGAGCAAGATGTGTGGTCAGCTGTACAGGAAAGAGCACTGGTTCAGGCTTTGAAAGCCTTCCCCAAGGAAGCTAGTCAGAGATGGGAAAGAGTTGCAGCAGCTGTCCCTGGGAAGACTGTGAATCAGTGCAAGAAAAAATTTGCAATGATGAAGGAGAACTTTAGAAGCAAGAAAAATGCAGCTTGA 1929 0.4049 MTSLSFFPCSVYVVLCFSFVTVLWLNSCVFLGHAFHFAALKLLGVEEDNTDVDDKKVVDDKEHMYLPSSDSYGSKSKKKSGSGDQQQDHYALLGLGHLRYLATEDQIRKSYRETALRYHPDKQASLLLAEETEAAKQAKKDEIESHFKAIQEAYEVLIDPVKRRNYDSTDEFDDEIPTDCAPQDFFKVFGPAFMRNGRWSVNQPIPSFGHNDTPLKEVDNFYNFWYTFKSWREFPHADEFDLEQAESRDHRRWMERQNAKLSEKARKEESARIRTLVDNAYKRDPRILRRKEEEKAEKQRKKEAKFLAKKLQEEEAARIAEEERRRKEEEDKRAAEAALQQKKVKEKEKKLLRKERARLRTLSVPILSQQLHDISEDDVENLCMTLDIEHLRSLCDNLDGKQALEQAKILRDAHGCKKDVDNKKDETTDRQNGSVRANGSSSASPGNLEKKEKPWSKEEIELLRKGMQKYPKGTSRRWEVISEYIGTGRSVEEIMKATKTVLLQKPDSSKSFDAFLEKRKPAQSIASPLTTREELEGKPTPGRPENNAASTANNLEDSSSESSDNQNSLGSVAANGVSSSSEQDVWSAVQERALVQALKAFPKEASQRWERVAAAVPGKTVNQCKKKFAMMKENFRSKKNAA 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2384 642 Gene3D - 576 642 - -
Sto13g2384 642 ProSiteProfiles Myb-like domain profile. 447 502 IPR001005 -
Sto13g2384 642 ProSiteProfiles Myb-like domain profile. 578 632 IPR001005 -
Sto13g2384 642 CDD DnaJ 88 159 IPR001623 -
Sto13g2384 642 CDD SANT 586 632 IPR001005 -
Sto13g2384 642 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 31 639 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Sto13g2384 642 MobiDBLite consensus disorder prediction 65 85 - -
Sto13g2384 642 SMART dnaj_3 87 162 IPR001623 -
Sto13g2384 642 ProSiteProfiles dnaJ domain profile. 88 170 IPR001623 -
Sto13g2384 642 CDD SANT 454 496 IPR001005 -
Sto13g2384 642 ProSiteProfiles SANT domain profile. 581 636 IPR017884 -
Sto13g2384 642 Gene3D - 448 505 - -
Sto13g2384 642 MobiDBLite consensus disorder prediction 432 447 - -
Sto13g2384 642 Pfam Myb-like DNA-binding domain 453 494 IPR001005 -
Sto13g2384 642 Pfam Myb-like DNA-binding domain 585 630 IPR001005 -
Sto13g2384 642 PRINTS DnaJ domain signature 40 58 IPR001623 -
Sto13g2384 642 PRINTS DnaJ domain signature 111 126 IPR001623 -
Sto13g2384 642 PRINTS DnaJ domain signature 142 162 IPR001623 -
Sto13g2384 642 SMART sant 451 504 IPR001005 -
Sto13g2384 642 SMART sant 582 634 IPR001005 -
Sto13g2384 642 ProSitePatterns Nt-dnaJ domain signature. 147 166 IPR018253 -
Sto13g2384 642 PANTHER DNAJ DOMAIN, MYB-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED 31 639 - -
Sto13g2384 642 MobiDBLite consensus disorder prediction 321 344 - -
Sto13g2384 642 SUPERFAMILY Homeodomain-like 453 497 IPR009057 -
Sto13g2384 642 MobiDBLite consensus disorder prediction 418 455 - -
Sto13g2384 642 Pfam DnaJ domain 88 167 IPR001623 -
Sto13g2384 642 Gene3D DnaJ domain 71 180 IPR036869 -
Sto13g2384 642 MobiDBLite consensus disorder prediction 544 585 - -
Sto13g2384 642 SUPERFAMILY Chaperone J-domain 86 194 IPR036869 -
Sto13g2384 642 MobiDBLite consensus disorder prediction 515 585 - -
Sto13g2384 642 SUPERFAMILY Homeodomain-like 584 639 IPR009057 -
Sto13g2384 642 Coils Coil 294 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2384 Sto-Chr13 30324817 30328024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2384 80 288 C2H2 Transcription Factor Family AT1G74250 29.032 1.63e-18 87.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sto13g2384 DnaJ 1.1e-17 CL0392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2384 K09522 - gmx:100806665 854.744