Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2378 ATGGAAGAGAATCATGCAGGGAGGAGCCTAAGCAGGAGGAAGAGTGGGAGTAGGACAAGCTGGAGAATGGAGGAATTGGTAATGTTTGGGAGTGGGCGTTATTCACACCATAGCTCTCACgcagaagaagatgaagaagctcTGAGATGGGCCGCCATAGAGAAGCTACCCACATACAATAGACTAAGAACAAGCATTCTGCAGAATGTCTCAGAGCAAGATGATGGCCAATTTGGTGGAGCCTCCAAGGAAGTTGATGTGAGGAAGTTGGATAACAATGAGAGGCAACAGATTATTAACAACATTTTCAAGGATGCTGAGCAAGACAATGAGAAATTCTTGAAGAGCTTCCGAGGGAGAGTAGACAAGGTTGGAATCAAACTTCCCACCGTGGAAGTGAGGTTCCAGAATTTGACAATTGAGGCTGATGCATACATAGGAAGTAGAGCTCTACCGACACTACCGAATGCTGCAATGAACATTCTGGAATCTGTTTTTGGGTCTTCTGGGAGTAATAAAAGAAAGCTCACAATTCTTAAAAATGCCTCTGGCTTTGTTAAGCCATCCAGAAAGACATCAGCATACATTAGCCAAAATGATGTGCATCTTGGAGAAATGACTGTCCAAGAAACCTTGGATTTCTCTTCAAGATGCCAAGGGGTTGGTTCTAGATATGAACTACTAACTGAGCTTGTTAGAAGGGAAAAGGAAGCAGGCATATTTCCAGACGCAGAACTTGACCTCCTCATCAAgGCTGCTGCTATACCAGCAGTAGAGAGTAGCCTCTTAACTGACTATACTCTCAAgATATTGGGGTTGGATGTATGCAAAGATACCATTGTGGGTGATGACATGCGAAGAGGTTTATCTGGTGGCCAAAAGAAGCGTGTAACTACAGGGGAGATGATAGTTGGGCCCACAAAAGCACTATTCATGGATGAAATATCAACGGGTCTGGATAGCTCCACCACGTAtcaaatagtgaaatgcttgcAGCAAATAGTACACCATACTGAAGCAACCATCCTCGTCTCCCTTCTTCAACCAGCTCCTGAAACCTTCAATCTCTTCGACGATATCATCCTTATCTCGGAGGCTCAGATTGTCTACCAGGGCCCACGCAATCACATTCTCGAATTCTTCCAATCTTGTGGCTTTACTTGCCCTGAACGAAAAGGAACTGCCGATTTCTTACAAGAGGTTACTTCGAGAAAAGATCAGGAGCAGTATTGGGCAGATAAGAGTAAGCCATATAAATATGTCACAGTTACGGAATTCGCAAACCGATTCAAGCAATTCCATGTGGGGGTTCAGATCGCGAACGATCTCTCCGTCCCATTCGACAAGGCGAGTGGCCACAAGGCGGCTCTTGTTTTCAAGACTTACTCGGTCCCTAAAATGGAGCTGCTTAAAGCGTGTTGGGACAAGGAATGGCTACTCATTAAGAAGAACTCCTTTGTCTACATCTTCAAGACGGTTCAGATCATCATTATTGCTTTCGTGGCTTCCACTGTGTTCTTGAGGACCTTACTGCACCAGAGGAACGAAAGTGATGGGGCAATCTACGTTGGTGCCCTTCTGTTCTCCATGATTATGAATATGTTCAATGGTTTCGCAGAGCTTTCGCTTATAATCCAAAGGCTTCCTGTGTTTTACAAGCAACGTGACCTTCTTTTCCATCCCACTTGGACTTACACCCTCCCCAATTTTCTACTTCGGGTCCCAATTTCAATGCTTGAGTCTATTGTTTGGTTGGTTATTACCTACTATTCTATAGGCTTTACACCTGAACCTAGCAGGTTCTTTAAGCAGCTATTTCTAATATTTCTCATTCAACAAATGGCAGCTGGCTTGTTTAGGGCCATTTCTGGAATTTGCAGGTCAATGATTATTGCTAACACAGGGGGATCACTCATGCTTCTTATCATTTTCTTATTGGGTGGTTTTATCCTTCCTAAACGTGACATTCCAATTTGGTGGTCGTGGGCCTACTGGGTTTCGCCTTTGTCATATGCCTACAATGGCCTTGCTGTGAATGAAATGCTTGCACCAAGGTGGATGGAGAAACCGTCTTCAGATGGTTCTACCACATTGGGTATAGCTGTATTACGTATGTTTGATGTTTTCCCTGAAGCAAGACGGTATTGGATAGCTGTAGTAGCTCTTGTAGCATTTGCAATTCTTTATAATGTTCTTTTCACAGTTGCACTTATGTACCTTAATCCTGTGGGAAAGAAACAAGCCATTATATCTGAAGAGGAAGCAAATGAACAGGAGACTGATGGAAATAACAAAGAAAGGGAAGGCAGCAAAACTAATCCTAGTCATTCAGAAAATAGTGACTCTATGAAAGAATCAACCACTGGAGCTGCCAATAAGAAGGGAATGGTTCTGCCTTTTACTCCACTTGCAATGTCCTTTGACAACCTTAATTACTTTGTGGACATGCCGGCAGAAATGAAGGAGCAAGGAGTTACAGAAGATAGGCTACAACTTCTTAGGGAAGTAACTGGATCCTTTAGGCCTGGTGTCCTAACTGCACTAATGGGTGTTAGTGGAGCAGGAAAGACAACCTTAATGGATGTTTTAGCAGGAAGAAAGACTGGTGGTTACATTGAAGGTGATGTTAGAATCTCTGGGTTCCCTAAGAAGCAAGAAACCTTTGCAAGAATTTCTGGTTACTGCGAACAAAATGACATCCACTCACCCCAAGTAACTGTTCGAGAATCTTTGATTTTCTCTGCTTTCCTCCGGTTACCTAAAGAAGTTAGTAGTGAAGAAAAGATGAAATTTGTGGACCAAGTGATGTATTTGGTGGAGTTGGATAATCTCAAGGATGCTATAGTAGGCCTTCCAGGAGTTACAGGGTTGTCAACAGAGCAGAGAAAGAGACTAACAATTGCAGTTGAGCTTGTTGCTAATCCTTCAATCATTTTCATGGATGAACCCACTTCAGGTCTAGATGCAAGAGCGGCAGCCATAGTTATGAGGGCTGTGAGAAACACTGTTGACACTGGAAGAACAGTTGTCTGCACAATTCACCAGCCTAGCATTGATATCTTTGAAGCCTTTGATGAGCAGCTCTTCTTGATGAAGAGAGGAGGGCGAACAATTTATGCAGGGCCACTTGGTCGAAATTCTCACAAGATTATAGAATTCTTTGAGGCAATTGAAGGGGTCCAAAAAATCCCAGATAAGTACAATCCAGCGACATGGATGCTAGAAGCAAGCTCCATTGCAGCTGAAGTTCGGCTTGGAATTGACTTTGCTGATTACTACAAGTCATCCTCTTTATATCAGCGAAACAAGGATCTTGTAAAGGAGTTAAGCACACCTCCAGCTGGGGTGAAGGATCTCTACTTCCCTACTCAGTATGCTCAGTCCACATGGGGGCAATTCAAATCTTGTCTATGGAAGCAATGGTGGACTTACTGGAGGAGTCCAGATTATAATCTTGTTAGATTATTCTTCACTTTGGTTGCTGCCTTCCTAATGGGGACAATATTCTGGAAAGTTGGCACTAAAAGgAGTAATTCCACTGATCTAACCATGGTTATAGGAGCTATGTTTACTTCTGTCCTCTTTGTTGGAATTAACAATTGCTCAACTGTTCAACCAGTAGTGGCTGTTGAGAGAACAGTATTTTATAGAGAAAAGGCTGCTGGAATGTATGCAGCATTGCCATATGCAGTTGCACAGGTTGTGTGTGAAATACCGTATGTGTTTTTCCAAACTGTATATTACTCGCTCATAGTGTATGCTATGGTGAGTTTTGAATGGGAAGCAAGGAAGTTTTTCTGGTTCTTCTTTGTgagcttcttctccttcttgtaCTTCACATATTACGGTATGATGACTGTTGCCATCACGCCAAACCACCAAGTTGCTGCAATCTTTGCATCAGCATTCTATGGGCTATTCAATATCTTCTCTGGTTTCTTTATCCCAAGACCAAAAATTCCAAAATGGTGGGTCTGGTATTACTGGATTTGCCCTATAGCATGGACTGTGTATGGATTAATTGTGGCACAATATGGTGATTCAGAGGAGATACTTGCAGTTCCTGGGATGGAAAATGGCGTATTGATCAAAGATTATATCACAAGCTATTATGGTTATGATCCAAACTTCATGGGTCCAGTTGCTGGAATTTTGGTCGCCTTCACTGTCTTCTTTGCTTTCATGTTTGCATTTGGAATTAGGATCATGGAAGGGAAGAGGATGATGAACACAGAGTATTATAACTCAGAGACGACAGAGAGGAACGTGAGTAGTAGTGTATTATTCAGGAAAGTGCTTAAGGAGAGCCACGTGAAGGCGCGTAGGTTGGACTTCCCCACGCGCTTCCTCAGCTTTCTcccatttcatcatcatcagccGTTGATGATGCGTAGGGTGAGATTCGAAGCTCGATATGGAAAGGAGGATGATGTACGGAGTTTCGAGTGCGTGGTACGGAATGGGCCGTATCTGAAGCCCACCATATCAAGAGGATGGTCTCAACTCCTACACGACAAGCGTCTCCGACCAGGAGATCTCATCATTTTCTacctccaccaccacccacaACAACCTCTGCACTTCACAATCCAAGCTTTCCGACCACAAAACATCAAGCTCTTTGGTACTTCTATTCTCACCTGGCATCCCATTCTTCCTTAA 4662 0.4221 MEENHAGRSLSRRKSGSRTSWRMEELVMFGSGRYSHHSSHAEEDEEALRWAAIEKLPTYNRLRTSILQNVSEQDDGQFGGASKEVDVRKLDNNERQQIINNIFKDAEQDNEKFLKSFRGRVDKVGIKLPTVEVRFQNLTIEADAYIGSRALPTLPNAAMNILESVFGSSGSNKRKLTILKNASGFVKPSRKTSAYISQNDVHLGEMTVQETLDFSSRCQGVGSRYELLTELVRREKEAGIFPDAELDLLIKAAAIPAVESSLLTDYTLKILGLDVCKDTIVGDDMRRGLSGGQKKRVTTGEMIVGPTKALFMDEISTGLDSSTTYQIVKCLQQIVHHTEATILVSLLQPAPETFNLFDDIILISEAQIVYQGPRNHILEFFQSCGFTCPERKGTADFLQEVTSRKDQEQYWADKSKPYKYVTVTEFANRFKQFHVGVQIANDLSVPFDKASGHKAALVFKTYSVPKMELLKACWDKEWLLIKKNSFVYIFKTVQIIIIAFVASTVFLRTLLHQRNESDGAIYVGALLFSMIMNMFNGFAELSLIIQRLPVFYKQRDLLFHPTWTYTLPNFLLRVPISMLESIVWLVITYYSIGFTPEPSRFFKQLFLIFLIQQMAAGLFRAISGICRSMIIANTGGSLMLLIIFLLGGFILPKRDIPIWWSWAYWVSPLSYAYNGLAVNEMLAPRWMEKPSSDGSTTLGIAVLRMFDVFPEARRYWIAVVALVAFAILYNVLFTVALMYLNPVGKKQAIISEEEANEQETDGNNKEREGSKTNPSHSENSDSMKESTTGAANKKGMVLPFTPLAMSFDNLNYFVDMPAEMKEQGVTEDRLQLLREVTGSFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDVRISGFPKKQETFARISGYCEQNDIHSPQVTVRESLIFSAFLRLPKEVSSEEKMKFVDQVMYLVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIDIFEAFDEQLFLMKRGGRTIYAGPLGRNSHKIIEFFEAIEGVQKIPDKYNPATWMLEASSIAAEVRLGIDFADYYKSSSLYQRNKDLVKELSTPPAGVKDLYFPTQYAQSTWGQFKSCLWKQWWTYWRSPDYNLVRLFFTLVAAFLMGTIFWKVGTKRSNSTDLTMVIGAMFTSVLFVGINNCSTVQPVVAVERTVFYREKAAGMYAALPYAVAQVVCEIPYVFFQTVYYSLIVYAMVSFEWEARKFFWFFFVSFFSFLYFTYYGMMTVAITPNHQVAAIFASAFYGLFNIFSGFFIPRPKIPKWWVWYYWICPIAWTVYGLIVAQYGDSEEILAVPGMENGVLIKDYITSYYGYDPNFMGPVAGILVAFTVFFAFMFAFGIRIMEGKRMMNTEYYNSETTERNVSSSVLFRKVLKESHVKARRLDFPTRFLSFLPFHHHQPLMMRRVRFEARYGKEDDVRSFECVVRNGPYLKPTISRGWSQLLHDKRLRPGDLIIFYLHHHPQQPLHFTIQAFRPQNIKLFGTSILTWHPILP 1553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2378 1553 CDD B3_DNA 1428 1534 IPR003340 GO:0003677
Sto13g2378 1553 Pfam ABC-2 type transporter 469 680 IPR013525 GO:0016020|GO:0140359
Sto13g2378 1553 Pfam ABC-2 type transporter 1132 1345 IPR013525 GO:0016020|GO:0140359
Sto13g2378 1553 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 805 1059 IPR003439 GO:0005524
Sto13g2378 1553 SMART AAA_5 842 1035 IPR003593 -
Sto13g2378 1553 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 826 1043 IPR027417 -
Sto13g2378 1553 PANTHER ATP-BINDING CASSETTE TRANSPORTER 12 1403 - -
Sto13g2378 1553 Pfam ABC-2 type transporter 348 401 IPR043926 GO:0140359
Sto13g2378 1553 Pfam ABC-2 type transporter 1014 1074 IPR043926 GO:0140359
Sto13g2378 1553 Pfam ABC transporter 833 985 IPR003439 GO:0005524
Sto13g2378 1553 Gene3D - 1410 1537 IPR015300 -
Sto13g2378 1553 SUPERFAMILY DNA-binding pseudobarrel domain 1427 1535 IPR015300 -
Sto13g2378 1553 MobiDBLite consensus disorder prediction 754 774 - -
Sto13g2378 1553 Pfam Plant PDR ABC transporter associated 686 750 IPR013581 -
Sto13g2378 1553 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 12 1403 - -
Sto13g2378 1553 Gene3D - 163 433 IPR027417 -
Sto13g2378 1553 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 390 IPR027417 -
Sto13g2378 1553 MobiDBLite consensus disorder prediction 754 788 - -
Sto13g2378 1553 CDD ABCG_PDR_domain2 802 1041 IPR034003 -
Sto13g2378 1553 Pfam ABC-transporter N-terminal 95 157 IPR029481 -
Sto13g2378 1553 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 133 390 IPR003439 GO:0005524
Sto13g2378 1553 Gene3D - 819 1052 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2378 Sto-Chr13 30266466 30278376 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2378 922 1017 Calmodulin-binding Proteins AT2G36910 31.250 4.35e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2378 K08711 - gmx:100806025 2120.51