Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2373 ATGGAACTATCAGATTTGCAAAACAACAAGAAGAACACATCCAGTAGGGGTACTGCTACTActcatccccaccaccaccacctcctgctccatcatcatcagcagcagcagcagcaaaaGCTGATACAGTTGCCTTCGTCAACGCAGGCTGTGGTCCCTTTTGATGGAGCCgcaggaggaggaagaggagctGGGACCTTAGGGATGGGCTCCATCCCCATCCAAGCGGGCCTATCGCGTGGTGCAACCACGCCTTCTTCATCGTCCACCTCGAATTCCGCTTCGCCGTCTTCTTCCGTATCTGCCGCGTGCGTTTCCTCATCCTCCGCTCCGCACCTCATCGACGCCTCCCTCGCCATCGCCACCAGATCTGATCCTCGATCCGCGCCTCTCCTCGTCGATTCCGACAAGAAAGCCCCAATTCAGCAGCAATTGACGATCTCCGCGCCGAATCCGAATCCGCCTCCGCCGCCGAAGCGATCGACGAAGGATAGGCACACCAAGGTGGACGGCCGAGGGAGGAGAATCCGAATGCCGGCGACGTGTGCGGCTAGGGTTTTTCAATTGACGAGGGAGCTGGGACACAAGTCGGACGGAGAGACGATCGAGTGGCTGCTGCAGCAGGCGGAGCCGGCCATCATCGCCTCCACCGGCACCGGCACGATCCCGGCGAATTTCTCTACTCTCAACGTGTCGCTCCGTAGCAGCGGATCCACCCTCTCGGCTCCGCCCTCCAAGTCCGCTCCTCATACCTTCCCTGGAGCTCTCGCGCTTTCTGCGCCCCATAATCATCATCACCCTTACGATGAAGCACCGTTCCCGCATTCTACTTTCTTAGGGTTCCATCCTCACCACCAGCATCACCAGAATCAGCCTCACCTGCTGACGGCCGACCAAATTGCAGGAGCGCTTCCCGCCGCCGCCGGCGGAGATAACAACGAGTCGAGGCAGAACTACATGAGAAAGCGGTTCAGAGAAGATTTATTCAAAGACgacgataataataataataatcaaggACGCAACGAGAGCGGAGATGGCGGAAACGGAAATTCTCCAAAGCAATTCAAAACCGACTTGCATCTGCCAAAACAACCGCAACAACAAACACCACCAGcagcaccaccaccaccagGAGGAGGCTCTTCATCGTCATCGAACCACAACAACCTTCTCCGACCTTCTAATTTACTCCCGGCCACCGCCATGTGGGCGATGGCGCCGCCTCCGACCAGCGGAGGAGCCGGCGGTGGCGCCGCGGGAAGCACATTCTGGATGCTGACCCCCGGAGGCGGCGTGTCGGCAGCGGGTGGCAGCGGCgtcgggtcgggctcgggctcgGAGACAAGCCCGTTAATGTGGGGAAGCGGAATGAGTACGCTGCAAGCGCCTCTTCAATTCATGCCCAGGTTCAATTTCGGTGAGTTTCAAGATGGTCGTggcggaggaggaggaggagaagggcTTCAATTAGGATCGTTGATGTCGTTGATGCAGCCACATCAGCAGCCGTCGCAGAATTTGGGGCTTGGAATGTCTGATTCGAACTTGGGAATGCTGGCTGCTCTGAATGCTTATTCTAGAGGTGGTTTGGGTGTGAATTCTGATCAGGGCCACCATAGCCATAGCCATAACCATCATCAGGGGAATGATAGTATTAGTGGAGAAGACGGTGCCAATAGTTCTCAATTGAGAGTTGAGTAG 1704 0.5088 MELSDLQNNKKNTSSRGTATTHPHHHHLLLHHHQQQQQQKLIQLPSSTQAVVPFDGAAGGGRGAGTLGMGSIPIQAGLSRGATTPSSSSTSNSASPSSSVSAACVSSSSAPHLIDASLAIATRSDPRSAPLLVDSDKKAPIQQQLTISAPNPNPPPPPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIASTGTGTIPANFSTLNVSLRSSGSTLSAPPSKSAPHTFPGALALSAPHNHHHPYDEAPFPHSTFLGFHPHHQHHQNQPHLLTADQIAGALPAAAGGDNNESRQNYMRKRFREDLFKDDDNNNNNQGRNESGDGGNGNSPKQFKTDLHLPKQPQQQTPPAAPPPPGGGSSSSSNHNNLLRPSNLLPATAMWAMAPPPTSGGAGGGAAGSTFWMLTPGGGVSAAGGSGVGSGSGSETSPLMWGSGMSTLQAPLQFMPRFNFGEFQDGRGGGGGGEGLQLGSLMSLMQPHQQPSQNLGLGMSDSNLGMLAALNAYSRGGLGVNSDQGHHSHSHNHHQGNDSISGEDGANSSQLRVE 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2373 567 MobiDBLite consensus disorder prediction 531 567 - -
Sto13g2373 567 Pfam TCP family transcription factor 161 325 IPR017887 -
Sto13g2373 567 MobiDBLite consensus disorder prediction 338 367 - -
Sto13g2373 567 MobiDBLite consensus disorder prediction 144 175 - -
Sto13g2373 567 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 21 563 IPR005333 GO:0003700
Sto13g2373 567 MobiDBLite consensus disorder prediction 62 102 - -
Sto13g2373 567 MobiDBLite consensus disorder prediction 159 175 - -
Sto13g2373 567 ProSiteProfiles TCP domain profile. 162 216 IPR017887 -
Sto13g2373 567 MobiDBLite consensus disorder prediction 236 292 - -
Sto13g2373 567 MobiDBLite consensus disorder prediction 1 19 - -
Sto13g2373 567 MobiDBLite consensus disorder prediction 1 41 - -
Sto13g2373 567 MobiDBLite consensus disorder prediction 77 102 - -
Sto13g2373 567 MobiDBLite consensus disorder prediction 552 567 - -
Sto13g2373 567 PANTHER TRANSCRIPTION FACTOR TCP8 21 563 - -
Sto13g2373 567 MobiDBLite consensus disorder prediction 327 394 - -
Sto13g2373 567 MobiDBLite consensus disorder prediction 380 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2373 Sto-Chr13 30229335 30231190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2373 159 516 TCP Transcription Factor Family AT1G35560 42.061 6.80e-55 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Sto13g2373 TCP 2.1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2373 - - tcc:18607218 459.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2373 13 30229335 30231190 Sto13g2373 13 30229335 30231190 ECH