Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2360 ATGCCATCAGTCAGACAACGACCtacttccaccaccaccaccaatcaACCCTCCACGTCACCACCGCCGGCGGTGGTAATTTCCCCCAATGACTTGCCGCAACAATCATCAGGAGCGctctcccaaaccctaaccggcGCCGCCAACTTGGCCAACCTTCTCCCCACCGGCACCCTCCTCGCCTTCCAGCTCCTCACGCCCCTCTTCACCAACAACGGCGCGTGCGATCCCACCACGCGCCTCCTCGCCCACtccctcctcttcctcctcgcCCTCTCCTGCTTCCTCGCCTGCTTCACCGACACCGTCAAGACCTCCGACGGCAGGGTGTACCACGGGATCGCCACATTCCGGGGGATGTGGGTATTCGACTACCCGGATCCGTTCGGGTCGGGTCTGCCCGATTTGAGCAGGTACAGGATGAGGGCGATCGATTGGGTGCACGCGATTCTGTCGGTGATGGTGTTCTGTGCGGTGGCGTTGAGGGATAGGAATGTGGTGAGCTGCTTGTATCCTTCGCCGGCGGATGATACGAAGCAGGTTTTGAATATTGTGCCTATGGGTGTTGGCGTTATGTGTAGCTTGTTGTTTGTGGTTTTTCCTACCACTAGGCATGGAATTGTTTTCTCGCTGCAATCTTCGCAATTTCCTAATAGGTTCATAATGTCGGGAGGATGTGGACGTGATGTTGGCAGTGTTGGATCTTGGTATGATTCGGGAGATTCGTCTCCGAAGAATAAGGTGAAGTTCTTGTGCAGCCATGGGGGGAAGATTCTTCCGAGACCTACCGACGGCCAGCTGAAGTATGTCGGCGGCGAGACTCGTGTTATCTCCGTGCCTCGTGACATCACTTCCTCAGTTTTGGAAGATTCTCTTGGTATCACTCTAATTCTCTTGAAGGATGAAATTGTAATGAAAAAGCTGATGCAGAAGGCCACTGCTCTAATTGACGGTGACATGGTCCTCAAATATCAGCCCTTCCATGAAGATCTTGATGCTTTGGTCTCAGTAAGGTCAGATGAAGATCTCAAGCACATGTTCAATGAGTGTGACTGCTATGAAAGTGGAGGAGCTTCCATGCTTCGAGCTTTCCTGTTTCCTCCCAGGCCACTTGTGTTAGAGAACCAAGCAGCAGCCTTTGAACCTTATTTGTTAGAACAGCGTTATATTGATGCCATCAATGGCATCATAAGATCAAGCTCAATGTCAATGCTTAGTCCTGGCGGAGTATTCAGTACTTCCTCTGCTTGTTCTTCCCCAAAATCCAACTCCCCAGATAGCCCTACTGTTGATACTGTGGGTTATGAATCCTTCTCCCTTAATGGTTCTTGTAGGTCAATGCCAATAATGCATAGAGTGAGAAGTTACCCCGGTATTAACAGCCCAAACAGCCAACATAGTCAATGTAGTAGTGGCATTTGCAgccctaattatcaacaatatgATTATGGTTACTGTCATAACAGCCACAACCACAATCAGCACTACCCTCCACACGGCAGCTGCCTATCAATTAGACCGCCGCCGCTAGATCCACAAGTAGGGTTTGGGATGGGAAGGCCACCCTCATCTTATTCAGTGGGGAAAAGCAGTCCTTTGCACCCTTCAAGTAGATACTACAAAGGGAATGGGGGCTACTCTAAGGTTGGTTACCATGATGAGTATGCTCCATTTAGGTTTGAAGGAGCCCTTAGTCTTCCTCGGAGTCCCAGACATCTAGTATCGTAG 1728 0.4803 MPSVRQRPTSTTTTNQPSTSPPPAVVISPNDLPQQSSGALSQTLTGAANLANLLPTGTLLAFQLLTPLFTNNGACDPTTRLLAHSLLFLLALSCFLACFTDTVKTSDGRVYHGIATFRGMWVFDYPDPFGSGLPDLSRYRMRAIDWVHAILSVMVFCAVALRDRNVVSCLYPSPADDTKQVLNIVPMGVGVMCSLLFVVFPTTRHGIVFSLQSSQFPNRFIMSGGCGRDVGSVGSWYDSGDSSPKNKVKFLCSHGGKILPRPTDGQLKYVGGETRVISVPRDITSSVLEDSLGITLILLKDEIVMKKLMQKATALIDGDMVLKYQPFHEDLDALVSVRSDEDLKHMFNECDCYESGGASMLRAFLFPPRPLVLENQAAAFEPYLLEQRYIDAINGIIRSSSMSMLSPGGVFSTSSACSSPKSNSPDSPTVDTVGYESFSLNGSCRSMPIMHRVRSYPGINSPNSQHSQCSSGICSPNYQQYDYGYCHNSHNHNQHYPPHGSCLSIRPPPLDPQVGFGMGRPPSSYSVGKSSPLHPSSRYYKGNGGYSKVGYHDEYAPFRFEGALSLPRSPRHLVS 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2360 575 SMART PB1_new 262 368 IPR000270 GO:0005515
Sto13g2360 575 MobiDBLite consensus disorder prediction 1 25 - -
Sto13g2360 575 Pfam Protein of unknown function (DUF679) 46 207 IPR007770 -
Sto13g2360 575 Gene3D - 295 366 - -
Sto13g2360 575 PANTHER BNAA08G14730D PROTEIN 12 210 - -
Sto13g2360 575 MobiDBLite consensus disorder prediction 1 21 - -
Sto13g2360 575 PANTHER PROTEIN DMP3 12 210 IPR007770 -
Sto13g2360 575 SUPERFAMILY CAD & PB1 domains 264 370 - -
Sto13g2360 575 Pfam PB1 domain 263 367 IPR000270 GO:0005515
Sto13g2360 575 CDD PB1_UP2 251 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2360 Sto-Chr13 30128145 30133528 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2360 246 406 MAP Kinase Kinase Kinase AT5G57610 42.331 2.25e-25 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2360 - - cpap:110809984 255.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2538 13 31548730 31549089 Sto13g2360 13 30128145 30133528 CCT
Sto13g2360 13 30128145 30133528 Sto13g2360 13 30128145 30133528 ECH