Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2357 atgcaaatgctggatcatccaaatattgttGCCCTTAGGCATTGTTTCTTTTCAACGACCGACAAAGAAGAAGTTTACTTGAATCTTGTACTTGAATATGTTCCTGAAACTGTTAACCGTATTGCAAGGAACTATAGCAGGATTAACCAGCGAATGCCTTTAATATATGTTAAGCTTTATACCTATCAGATTTGCAGGGCGCTTGCTTATATTCATAATTGCATTGGAATATGTCATCGTGACATCAAACCTCAGAACTTACTAGTGAACCCACACACACATCAGCTGAAACTTTGTGATTTTGGAAGTGCAAAAATGTTGGTGAAAGGAGAACCAAATGTTTCTTACATCTGTTCAAGATACTACCGTGCTCCAGAGCTTATATTTGGTGCCACTGAGTACACAACTGCCATAGATATATGGTCAACTGGTTGTGTAATGGCTGAACTACTTCTTGGGCAGGTATtgaatatgtaa 477 0.3564 MQMLDHPNIVALRHCFFSTTDKEEVYLNLVLEYVPETVNRIARNYSRINQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVNPHTHQLKLCDFGSAKMLVKGEPNVSYICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQVLNM 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2357 158 ProSiteProfiles Protein kinase domain profile. 1 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2357 158 SUPERFAMILY Protein kinase-like (PK-like) 1 156 IPR011009 -
Sto13g2357 158 SMART serkin_6 1 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2357 158 Pfam Protein kinase domain 1 155 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2357 158 ProSitePatterns Serine/Threonine protein kinases active-site signature. 77 89 IPR008271 GO:0004672|GO:0006468
Sto13g2357 158 PANTHER BNAA08G26100D PROTEIN 1 156 - -
Sto13g2357 158 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 1 156 - -
Sto13g2357 158 Gene3D Phosphorylase Kinase; domain 1 1 35 - -
Sto13g2357 158 Gene3D Transferase(Phosphotransferase) domain 1 36 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2357 Sto-Chr13 30109501 30111598 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2357 7 156 Core Cell Cycle Gene Families AT1G76540 37.255 3.71e-32 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Sto13g2357 Pkinase 3.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2357 K03083 - gmx:100799387 320.472