Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2351 ATGGAATTCACAGTCACGGTTACTCTCAACTTGATTCAATCTCTCCTCATCATTTCCACTTTCACATTTGGTTTAAGCTCTGCCAGAGATAACATTACATCCTCCCAATTCATCAGAGACAATCACTCTGACACAATGACTTCTAACAACACTGACTTCACACTGGGATTCTTCACCCCTCCAAATTCAACCCATCGCTATGTGGGAATCTGGTATCTCTCCCAAACCAACATCATCTGGATAGCTAACAGAGACCAACCCCTCAACCATTCTTCTGGGATTTTCACAATTTCCCAGGATGGCAACCTCGTCATACTCACTACACAGAATACACTACTCTGGTCATCCAACGTGTCCAACAACGCTACCACCAACACAACAGCACAGCTTCAAGATTCAGGCAACCTCGTCCTGCTAGATAACACCACTGGAGAGGCAATATGGCAGAGCTTCGATCACCCTTGTGATGCGGCCGTTCCAAAGATGAAGATAAGCGCCAATAGATTCACAGGTAAGAAAACAAAGTTTGTGTCCTGGAAAACCCCTTCTGATCCATCTTCTGGCTACTTCACGGGTAGTCTCGAACGCCTGGATGTTCCAGAAGTGTTCTTCTGGGTCAATGAGACAAAGCCATATTGGCGAACGGGTCCATGGAATGGACGGGTCTTCATCGGGTCACCCCAAATGTCATCTGGATATCTATATGGGTGGAATCTGGTGAATCAAGTGGATGGAACCGTTTACCTTACTTACAACTTCATAGATCCAGCTTCCACTGCAATCCTTGACTTGAACCCACAAGGCAAACTCCAACTGGTGAGATTCTACAACAAGAAGAAAATTCTGAGTATGGAAATTTCACAAACAGCTTGCGATCACTACGGCACGTGCGGGGAGTTTGGGAGCTGTAATGTGCAGGATACGCCCATTTGCAGCTGCCTAAAAGGGTTTGAGCCTAGGAATTCAGAGGAATGGAAGAGGCAAGATTGGAGGAGTGGGTGTGTGAGGAAATCGGCATTATTGAAGTGCGTGGGGTGGAGGAATGGAAGCGAAGTTGGGGGAGAAGATGGGTTTGTGAAATTGGAGAATATGAAAGTGCCAGACTTGGCGGAGAGATCGGATGCGGATACGGAAGGGCAGTGCGGAAATGAGTGCTCGGGGAATTGCTCTTGCTTGGCCTATGCATATGATGCTGGGATAGGATGCATGTATTGGAGCAGAGACTTGATTGACGTTCAAAAATTCTCGAGTGGAGGAGTTAATCTCTACATTCGTCTTGCCCATTCAGAACTTGGAAATCATTCAGGAAAAAGCAAAAACAAGAGAGCAATAATTGCAGTTACGGTATCAATAGGAACGATTACCTTAGTTGCTGCTGCTGTAGCATTTCTAATTGTCCGTACCCGTCGCTCTCGGCGCAAATGGACTCCTCAATATAGAGCGCATCCAGGAAACCAGAGTCCAAAAGTGAATGAGGACAACAAACAAGTTAAGCTGGATGAGTTACCACTATTTGATTTTGAAGAACTTGCAAGTGCTACTAACAATTTTCACTTAGCAAACATGCTAGGGAAGGGTGGTTTTGGTCCAGTTTACAAGGATGGCAACCTTGTGATCCTCAATGCACAAAATCTGCTACTCTGGTCATCCAACGTGTCAAACAACGCTACCACCAACACAACAGCACAGCTTCAAGATTCAGGCAACCTCGTTCTGCTGGATGACACCACTGGAGAGACAGTATGGCAGAGCTTCGATCACCCTTGTGATGCAGCAGTTCCAAAGATGAAGATCAGCGCCAACAGATTCACAGGTAAGAAAATGCATTTTGTGTCATGGAAAACCCCTTCTGATCCATCTTCTGGCTACTTCAGTGCCACTCTAGAACGCCTGGATGTTCCAGAAGTGTTCTTCTGGGTGAATGGGACAAAACCATATTGGCGAACGGGTCCATGGAATGGAATTGTCTTCATCGGAACACCCCAAATGTCAAATGGATATCTATATGGATGGAGTGTGGTGAATCAAGCGGATGGAACTGTTTATCTTACTTTCAATTTCATAGATCCAGCTTCCTTTGCCATCCTTAACTTGAACCCACAAGGCAAACTCCAACTGGTCACGTTCTACAACAAGAAGCGAATTCTGAGTGCGGAATTATTACAAACAGCTTGCGGGTACTACGGCACGTGCGGGGAGTTTGGGAGCTGTAATGTGGAGGATACGCCCATTTGCAGCTGCCTAGAAGGGTTTGAGCCCAGGAATTTAGAGGAATGGGAGAGGCAAGATTGGAGGAGTGGGTGCGTGAGGAAATCAGCATTATTGAAGTGCGTGGGGTGGAGGAATGGAAGCGAAGTTGGGGAAGAAGATGGGTTTCTGAAATTGGAGAATATGAAAGTGCCAGACTTGGCGGAGAGATCGGATGCGGATACGGAAGGGCAGTGCGGAAATGAGTGCTCGGGGAATTGCTCTTGCTTGGCCTATGCATATGATGCTGGGATAGGATGCATGTATTGGAGCAGAGACTTGATTGACGTTCAAAAATTCTCGAGTGGAGGAGTTAATCTCTACATTCGTCTTGCCCATTCAGAACTTGGAAATCATTCTGGAAAAagcaaacataaaagagcaataatcagaatttcaatatcaatatcagGAATGATTATCTTGGCCGCTTCTGCGTATCTAGTCCTATCTGCCTATCGCTCTCGGCACAAATGGATCACTCGACGTAGAGGACATCATAGTCAAAACGTGAATGAGGACAGCAAACAAGTGAAGCTGGATGAGATATCACTCTTTGATTTTGAAGAACTTGCAAGTGCAACAAACAACTTTCACTTAGCTAACATGCTTGACATGAGAGGTATctacctctccttcttcttcctcactttCCTCCCCACAATCTCAATCTCGTCCGACACCTTAACTTCAACCCAATCTCTCTCACACAACCAAACCCTCGTATCCCCCAACCAAATCTTCGAGCTGGGCTTCTTTTCCTCCACCAATTCCCAATGGTTTCTCGGAATTTGGTACAAAAACATTGACCACAAAACAGTGGTGTGGGTCGCAAACAGAGACACCCCACTTCAGAGCCCCTACGCAACTCTCAAGATCGGAGACAGAGCAAACCTCGTCCTCCTCGATCAATCCGCAAAAACCATATGGTCCACCAATCAAACCACCACGAATCCCACTCCAAACCCAATTCTCCAGCTCCTAGATTCCGGGAATCTAATTCTCGCAACACAACCCACCACGAACCTCAACGACCCTTCGAAATTCCTATGGCAGAGCTTCGACTACCCCTCGGACACTCTCTTACCCGGCATGAGACTCGGCTTGGACTTGGACACCGGACGAGAGCGACACATCACGTCGTGGAGATCCACCGGAGACGACCCCACCACCGGAGATTTCTCCTTCAAGCTGGACTCCCGCGGCCTGCCGGAGATTTTCCTGGTAAAGAAACAGAAAATAGTGTACCGAAGCGGCCCTTGGAACGGCGAGAGATTCAGCGGAGTCCCCGAGATGCAACCCGGCACGGATTCCATCAAATTCAGCTTCATCGCGAACGAGCACGAAGCCTACTACACATTCTCCATCGGGAACCAATCCCTATTCTCCAGGCTCGTCGTGGATTCCGCGGGCGAGCTCCAGAGGCTGACGTGGATCGAGAGCACGAGAGTTTGGACCAAATTCTGGTACGCGCCCAAGGACCAGTGCGATTACTACAGGGAGTGCGGCGCGTGGGGCGTGTGCGACGCGAACGCGTCGCCGGTGTGCCAGTGCGTGAGGGGGTTCAGGCCGAAGAACGCGCAGGCGTGGAATCTGAGGGACGGGTCGGATGGGTGCGTGAGGGAGACGGAGGTGGGGTGCGAAGGGGATATTGGGTTCTTGGAGATGAGGAATGTGAAGCTGCCGGAGACGACGTGGGTGGTGGTGAATAGAAGCATGAGTCTTCGGGAGTGTGGGGACGCGTGTGGGCGGAATTGTTCCTGCACTGCTTATGCTAATGTGGAGATCACCAATGGGGGAAGTGGGTGTGTCATGTGGGGGGGTGACCTTATGGACATAAGGCAGTACCCTACGGGAGGCCAGACTCTTTATGTTAGATTGCCTGCTTCTGAGCTTGATAACCTAGGATCTGCAAGTGGCTCTCACAAGGCAAAAGATGTGGCTAAGGTTGTAGGCATTACAGTTGCAGCAGCTATTGTACTTCTGGGATTGAGTACCTATTTcttatggaagaagaagaaattgcaAAGCTTACTGAAAGGGAAGACAGAATTCAGAGGCATTATAGAGAGAAGTCAAGATTTGCTAATGACTGAGGCTGTAATTTCAAGTAATAGAGAACACTCATTTGAAAGAAACAACTTGGATGACCTAGAGCTTCCATTGTTTGATTTTAATACCATTACAGTGGCTACAAATAACTTCTCTGAAGAAAATAAACTTGGACAAGGTGGATTTGACAAAGCAAAAAGATCCATATTGGATTGGCAAAGGCGCTTCAGCATTATATGTGGAATAGCTAGAGGGCTTCTTTATTTGCATCAAGATTCCAGGTTTAGGATTATCCATAGGGATCTCAAAGCAAGCAATATTCTACTTGACAGAGAAATGAATCCAAAGATATCAGACTTTGGGATGGCTAGAATTTTTGGCAAAGATCAGACAGAAGCAGAAACAATGAGAGTTGTTGGAACATAG 4725 0.466 MEFTVTVTLNLIQSLLIISTFTFGLSSARDNITSSQFIRDNHSDTMTSNNTDFTLGFFTPPNSTHRYVGIWYLSQTNIIWIANRDQPLNHSSGIFTISQDGNLVILTTQNTLLWSSNVSNNATTNTTAQLQDSGNLVLLDNTTGEAIWQSFDHPCDAAVPKMKISANRFTGKKTKFVSWKTPSDPSSGYFTGSLERLDVPEVFFWVNETKPYWRTGPWNGRVFIGSPQMSSGYLYGWNLVNQVDGTVYLTYNFIDPASTAILDLNPQGKLQLVRFYNKKKILSMEISQTACDHYGTCGEFGSCNVQDTPICSCLKGFEPRNSEEWKRQDWRSGCVRKSALLKCVGWRNGSEVGGEDGFVKLENMKVPDLAERSDADTEGQCGNECSGNCSCLAYAYDAGIGCMYWSRDLIDVQKFSSGGVNLYIRLAHSELGNHSGKSKNKRAIIAVTVSIGTITLVAAAVAFLIVRTRRSRRKWTPQYRAHPGNQSPKVNEDNKQVKLDELPLFDFEELASATNNFHLANMLGKGGFGPVYKDGNLVILNAQNLLLWSSNVSNNATTNTTAQLQDSGNLVLLDDTTGETVWQSFDHPCDAAVPKMKISANRFTGKKMHFVSWKTPSDPSSGYFSATLERLDVPEVFFWVNGTKPYWRTGPWNGIVFIGTPQMSNGYLYGWSVVNQADGTVYLTFNFIDPASFAILNLNPQGKLQLVTFYNKKRILSAELLQTACGYYGTCGEFGSCNVEDTPICSCLEGFEPRNLEEWERQDWRSGCVRKSALLKCVGWRNGSEVGEEDGFLKLENMKVPDLAERSDADTEGQCGNECSGNCSCLAYAYDAGIGCMYWSRDLIDVQKFSSGGVNLYIRLAHSELGNHSGKSKHKRAIIRISISISGMIILAASAYLVLSAYRSRHKWITRRRGHHSQNVNEDSKQVKLDEISLFDFEELASATNNFHLANMLDMRGIYLSFFFLTFLPTISISSDTLTSTQSLSHNQTLVSPNQIFELGFFSSTNSQWFLGIWYKNIDHKTVVWVANRDTPLQSPYATLKIGDRANLVLLDQSAKTIWSTNQTTTNPTPNPILQLLDSGNLILATQPTTNLNDPSKFLWQSFDYPSDTLLPGMRLGLDLDTGRERHITSWRSTGDDPTTGDFSFKLDSRGLPEIFLVKKQKIVYRSGPWNGERFSGVPEMQPGTDSIKFSFIANEHEAYYTFSIGNQSLFSRLVVDSAGELQRLTWIESTRVWTKFWYAPKDQCDYYRECGAWGVCDANASPVCQCVRGFRPKNAQAWNLRDGSDGCVRETEVGCEGDIGFLEMRNVKLPETTWVVVNRSMSLRECGDACGRNCSCTAYANVEITNGGSGCVMWGGDLMDIRQYPTGGQTLYVRLPASELDNLGSASGSHKAKDVAKVVGITVAAAIVLLGLSTYFLWKKKKLQSLLKGKTEFRGIIERSQDLLMTEAVISSNREHSFERNNLDDLELPLFDFNTITVATNNFSEENKLGQGGFDKAKRSILDWQRRFSIICGIARGLLYLHQDSRFRIIHRDLKASNILLDREMNPKISDFGMARIFGKDQTEAETMRVVGT 1574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2351 1574 Pfam S-locus glycoprotein domain 213 320 IPR000858 GO:0048544
Sto13g2351 1574 Pfam S-locus glycoprotein domain 1165 1275 IPR000858 GO:0048544
Sto13g2351 1574 Pfam S-locus glycoprotein domain 647 754 IPR000858 GO:0048544
Sto13g2351 1574 ProSiteProfiles Bulb-type lectin domain profile. 29 151 IPR001480 -
Sto13g2351 1574 Gene3D - 970 1103 IPR036426 -
Sto13g2351 1574 Gene3D - 25 151 IPR036426 -
Sto13g2351 1574 SMART ntp_6 1297 1376 IPR003609 -
Sto13g2351 1574 SMART ntp_6 787 860 IPR003609 -
Sto13g2351 1574 SMART ntp_6 353 426 IPR003609 -
Sto13g2351 1574 ProSiteProfiles Protein kinase domain profile. 1376 1574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2351 1574 ProSiteProfiles Bulb-type lectin domain profile. 975 1097 IPR001480 -
Sto13g2351 1574 Pfam Receptor serine/threonine kinase 1439 1474 IPR022126 GO:0004674
Sto13g2351 1574 SUPERFAMILY alpha-D-mannose-specific plant lectins 68 185 IPR036426 -
Sto13g2351 1574 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1495 1574 - -
Sto13g2351 1574 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 534 955 - -
Sto13g2351 1574 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 16 533 - -
Sto13g2351 1574 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 961 1496 - -
Sto13g2351 1574 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1530 1542 IPR008271 GO:0004672|GO:0006468
Sto13g2351 1574 ProSiteProfiles PAN/Apple domain profile. 1296 1377 IPR003609 -
Sto13g2351 1574 SMART blect_4 495 588 IPR001480 -
Sto13g2351 1574 SMART blect_4 981 1106 IPR001480 -
Sto13g2351 1574 SMART blect_4 35 154 IPR001480 -
Sto13g2351 1574 Pfam D-mannose binding lectin 78 180 IPR001480 -
Sto13g2351 1574 Pfam D-mannose binding lectin 532 614 IPR001480 -
Sto13g2351 1574 Pfam D-mannose binding lectin 1022 1132 IPR001480 -
Sto13g2351 1574 SUPERFAMILY alpha-D-mannose-specific plant lectins 532 653 IPR036426 -
Sto13g2351 1574 Pfam PAN-like domain 788 846 IPR003609 -
Sto13g2351 1574 Pfam PAN-like domain 354 412 IPR003609 -
Sto13g2351 1574 Pfam PAN-like domain 1296 1362 IPR003609 -
Sto13g2351 1574 ProSiteProfiles PAN/Apple domain profile. 343 427 IPR003609 -
Sto13g2351 1574 ProSiteProfiles Bulb-type lectin domain profile. 464 585 IPR001480 -
Sto13g2351 1574 CDD PAN_AP_plant 787 861 - -
Sto13g2351 1574 CDD B_lectin 45 154 IPR001480 -
Sto13g2351 1574 Pfam Protein kinase domain 1506 1573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2351 1574 ProSiteProfiles PAN/Apple domain profile. 777 861 IPR003609 -
Sto13g2351 1574 PANTHER - 961 1496 - -
Sto13g2351 1574 PANTHER - 16 533 - -
Sto13g2351 1574 PANTHER - 534 955 - -
Sto13g2351 1574 PANTHER - 1495 1574 - -
Sto13g2351 1574 SUPERFAMILY alpha-D-mannose-specific plant lectins 1022 1172 IPR036426 -
Sto13g2351 1574 Gene3D - 511 649 - -
Sto13g2351 1574 CDD PAN_AP_plant 1292 1377 - -
Sto13g2351 1574 SUPERFAMILY Protein kinase-like (PK-like) 1470 1574 IPR011009 -
Sto13g2351 1574 CDD B_lectin 981 1106 IPR001480 -
Sto13g2351 1574 Gene3D Transferase(Phosphotransferase) domain 1 1489 1574 - -
Sto13g2351 1574 CDD PAN_AP_plant 353 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2351 Sto-Chr13 30009906 30037911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2351 1472 1574 Receptor kinase-like Gene Family AT4G23280 57.031 5.53e-35 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sto13g2351 B_lectin 5.6e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2351 - - aprc:113860154 739.569