Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2347 ATGACGTCTCATCATCCGCCGGAGTTTGATGCCGACTCGGTGGCCTCCTCCCCTCGCTCCGATCACTTCCACGAGCCCCTCCCACGTGTTCGCTTCATGTGCAGCTTCGGCGGCAAGATTCTCCCCCGCCCCCACGACAACCAGCTCCGTTACGTCGGCGGCGACACACGAATTGTCGCCGTCAACCGCTCCATCTCCTTCTCCGGCACCACTAATATAACAGTGAAGTACCAGCTTCCCAATGAGGATCTCGACGCGTTGATTTCCGTGACCACCGACGAGGACGTGGAGAACATGATGGATGAGTACGAGCGGTTAGCACAGAATCAAAACCCGCGCTCGGCTCGGCTCCGCCTCTTCCTCTTCGTGAAGGGAGAAGATTCTAATTCTAGAGCCAGCAGTATCAGCTCCCTCCTCGACGGCTCCGCTAACCGCGAGAATTGGTTCCTCGACGCCCTCAACGGCGGCGGGGCGCGGCTCGAGCGAGGCCGATCCGAAGCGTCCTCTATGGTGTCGGAAGTACCTGATTATCTCTTCGGCTTGGAAAACTCCGACGAGCCCCAGATACGAGAACCGAGGTCCAAGACCCGACTCGTTCATAACGACAATGTCTCGTGTTCGGATCCTGGCTCGCCTGCTCCGGTTGTCTCCTCGCCGTTCTGTTCCACGTCATCCGTTCCCAACGTTCCGTCCATACCAAACCTCCCGCCGGTCAAAACCAAACCCGATAACCCGGTTCCTGTGGCGGAGCCAAAAGAGAATCAAACCGACGGTTTCCAAATGGGAAACCCCGGGAACCAGGTGCTGCATTACACCCCGGACTCGACTTATACGGGTCATTCGGTACAACCGGTTCCGGTTTACTATTATCCGGGCCACGTCCCGGTTCAACACGGGAAAGTGCCGGTCCAACCAGTGCCAATTCCGACTCAATATGTCCAACAATACCCTGCGCCTGCGGTAATGCCAGCTCAAGTGCCAATAGGGTACCATCCTTATGTTCCGGGTCCGGGTCAAGCATATGCTGGAGGGATGAGACCCGTTGGGATGGTGCATCCATATGACACGACGGCGGCGAGGGTAGTTCCGGACGGTGTGAGTGTGAGGCAGCCTGTGTACCATGCAGTTCCAAATTCGGGTGGTGCTCCCGTTTATCCGATGATGGCCAGGGCAGGTGGGGAGGAATTGCAGAGATCTGGATCGGATATGGGTCGGGTCGGGGCACCAACACCAAATGAATGA 1242 0.5749 MTSHHPPEFDADSVASSPRSDHFHEPLPRVRFMCSFGGKILPRPHDNQLRYVGGDTRIVAVNRSISFSGTTNITVKYQLPNEDLDALISVTTDEDVENMMDEYERLAQNQNPRSARLRLFLFVKGEDSNSRASSISSLLDGSANRENWFLDALNGGGARLERGRSEASSMVSEVPDYLFGLENSDEPQIREPRSKTRLVHNDNVSCSDPGSPAPVVSSPFCSTSSVPNVPSIPNLPPVKTKPDNPVPVAEPKENQTDGFQMGNPGNQVLHYTPDSTYTGHSVQPVPVYYYPGHVPVQHGKVPVQPVPIPTQYVQQYPAPAVMPAQVPIGYHPYVPGPGQAYAGGMRPVGMVHPYDTTAARVVPDGVSVRQPVYHAVPNSGGAPVYPMMARAGGEELQRSGSDMGRVGAPTPNE 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2347 413 MobiDBLite consensus disorder prediction 392 413 - -
Sto13g2347 413 PANTHER OS05G0427100 PROTEIN-RELATED 1 402 - -
Sto13g2347 413 SMART PB1_new 44 124 IPR000270 GO:0005515
Sto13g2347 413 CDD PB1_UP2 33 122 - -
Sto13g2347 413 MobiDBLite consensus disorder prediction 1 22 - -
Sto13g2347 413 Pfam PB1 domain 46 123 IPR000270 GO:0005515
Sto13g2347 413 SUPERFAMILY CAD & PB1 domains 45 130 - -
Sto13g2347 413 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P 1 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2347 Sto-Chr13 29983818 29985205 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2347 19 122 MAP Kinase Kinase Kinase AT3G46920 49.558 6.83e-31 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2347 - - aprc:113858359 523.472