Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2334 ATGGGTGATGAAGAGGGAAGCAGAGTAGCGAGAATAGACCAGAGCTCGCCGGGATCGTTCGCCGGAGATTCTACTCTCCGGCGAGCCGTGGAGTTGATAACCTCCTTgatttctctttctcattcaGTCAGGGTCTTCGCTGCAAAATGGCAGCTGATTCGGAGCAAGCTCGAGGAGCTTCATTCCGGGCTAATCGCCGCCGAGAGCTGCGATTCCGGCGAGGACCCTTCTCTCTCCGGTCTGGTTCCTGCAATATTGGCCACGGTGAACGATTGTTACGATCTCGCTCGCCGCTGCGTCGATCTTTCTTACAGCGGGAAGCTTCTGATGCAGAGCGATTTGGACGCGATGTTCACCAAGTTCGATCGCCATGTGAAGAAGCTATCGGAGGTATACACAACCGGTATTCTGACTCACAAGTACGCTCTCGTTGTTTCGAGGCCTAGTCTCGGGGCTTGCAAAGATGACATGAGGTTTTACATGAGGGATTTGCTCACAAGAACGAAGATTGGCGATGTGGAAATGAAGAGACAGGCGTTGATTAATCTACACGAGTCTGTGATGGAAGATGAAAAGTATGTTAAAGTGATTGTGGAAATGGGAGATATTATTCATGTTCTGGTGAATTTTCTCGATTCCCCAGAAATGGAAATCCAAGAAGAATCTGCCAAGGTGATTTCTGTAATCGCAGGATTTGATTCCTACAGAGGGGTTTTGATAACATCTGGGATTATAGCGCCTCTGATTCGGATTTTGGAATGTGGGAGTGAGTCAGGGAAGGTAGCATCTGCaaggtgtttgatgaaattAACTTTCAATTCTGATAATGCTTGGTCGGTTTCAGCTCATGGAGGAGTCACATCCTTGCTTAAAATTTGCGCTAATGGAGAATCCGAAGGAGAATTGGTTGGTCCTGCTTGTGGGGTGCTGAGAAATCTAGTAGCTGTTGAAGAAATAAAGAGATTCATGGTTGAAGAAGGTGCGGTTTCTACGTTTATCCGGCTTGTGAGATCCAAGGACGAAGCGATTCAGGTAAATTCCATACAGTTCATTCAAAGTATTGCCTCTGGGGATGAATTAGTTAGGCAAATGGTGATTAGAGAAGGTGGGGTTCGTGCCCTGTTACGTATTATGGATCCTAAATGGTCGTATTCTTCTAAAACCAGGGAGATAGCAATGAGAGCTATTGAGAATTTATGTTTTTCTTCATCTAGTTCTGTAAGTTTATTGATGAATTATGGGTTTGTGGATCAACTGCTATATTATATTCGCAATGGGGAGGTTTCCATCCAAGAATTGGCTCTGAAAGTGACATTCAGATTCTGTGGAACATCAGAGGAGGCTAGGAAAGCAATGGGCGATGCAGGTTTCATGCCAGAGCTTGTGAAGTTTCTAAGTGCAAAATCATTTGAAGTTCGTGAGATGGCAGCCGAGGCACTATCTGCCATGGTTCTGGTACCCAAAAACAGAAAGAAATTTGTGCAGGATGACCAAAACATCTCCCTTCTTCTACAATTGCTTGACCCAGAAGAGGGAAATTCAGGTCACAAGAAGTTCTTAATATCTATCTTAATGTCATTAACAAGTTGTAACAGTGGGAGAAAAAAGATTGTGAGTTCTGGGTATGCCAAAAACATAGAGAAACTTGCAGAAGCTGAAGTTTCTTCTGATGCCAAGAGACTTGTGAGGAAGCTATCCACAAACAGGTTCCGCATGCGTTCTCCAAATCTTCTCCATCTCCTCAATCGGAATGCCCTTAGTCTCAGGAAGGAAGAAGTAGACGAAAAGGGTCATCACCAACACAAAGAAGCCAAAGAAAATGAAGAGCCCAAACTTCATATGGCAAAGCATGGTGAGAAATATCTGTGCAACCACAAATGTGAAGAGCATATTTGTAGCCACCGTCACACTCTGAGCCGCAGATCGGATCtccaatggaaaaatctcacTAGGCACCAACCACCCCAAGGGACCCCAAGACCAAGCAAAACCCATCAcataaacacaaataaaagCCACCACCACTATGGCATACCACACAGGCAACGTCCCAGGATTCCCATCAATCCCAAACTTAACCCCAATAGCAATTGCAActataatttgacatataagCATTTGAATTCCACCTTCAAGAAACAGGGCCCTCCTACCCCACTTATCAACTCCATAAATGGACACTCCAGTAGCCAACATATTGATGAAGCCGGTAATAACAGCCGACATCAATGCTGCATCGGTTtgaaatccaatggaattaaaCAGAACAGGTGCATAGAACATTATGACATTAATGCCAGTGAACTGTTGGAAGAATGGGATCATGATGGACATTGTGAGATGGGGTCTGTACTTTCTCTGAAGCAAGTTCTTCCAAGGGTGTTTGACTTGCTTAGATGCCTCACTTGCCGCGACAAGATCATTGAATTCTGCATCGACCTCTTTCACTCCTCGGATTTTCTCCAGTTGTTGTCTGGCTTTCTCGTGGTTGCCTCGTGCGATCATGGAATTGGGAGCGCCATCTCAGACAAGTATAGCGGCACAGACTGGTTGCAAAATCCAATACCAAAGCCAAGCAAGATGCGTCCTAAGATCAACATCCAAACATATTGGGAAAAGGCATTGATTAAGGCTCCAGCGAGGAAAACGAGACCTCCCAAGAGCATGGAGATTTTGCGTCCAAATTTGCGTGTGATTGTGGAAGCCACCAAACTGGACAATAGTGCGGCAAGATACAAAGATGATGTGAATGAGGTCAATACTTGA 2766 0.4367 MGDEEGSRVARIDQSSPGSFAGDSTLRRAVELITSLISLSHSVRVFAAKWQLIRSKLEELHSGLIAAESCDSGEDPSLSGLVPAILATVNDCYDLARRCVDLSYSGKLLMQSDLDAMFTKFDRHVKKLSEVYTTGILTHKYALVVSRPSLGACKDDMRFYMRDLLTRTKIGDVEMKRQALINLHESVMEDEKYVKVIVEMGDIIHVLVNFLDSPEMEIQEESAKVISVIAGFDSYRGVLITSGIIAPLIRILECGSESGKVASARCLMKLTFNSDNAWSVSAHGGVTSLLKICANGESEGELVGPACGVLRNLVAVEEIKRFMVEEGAVSTFIRLVRSKDEAIQVNSIQFIQSIASGDELVRQMVIREGGVRALLRIMDPKWSYSSKTREIAMRAIENLCFSSSSSVSLLMNYGFVDQLLYYIRNGEVSIQELALKVTFRFCGTSEEARKAMGDAGFMPELVKFLSAKSFEVREMAAEALSAMVLVPKNRKKFVQDDQNISLLLQLLDPEEGNSGHKKFLISILMSLTSCNSGRKKIVSSGYAKNIEKLAEAEVSSDAKRLVRKLSTNRFRMRSPNLLHLLNRNALSLRKEEVDEKGHHQHKEAKENEEPKLHMAKHGEKYLCNHKCEEHICSHRHTLSRRSDLQWKNLTRHQPPQGTPRPSKTHHINTNKSHHHYGIPHRQRPRIPINPKLNPNSNCNYNLTYKHLNSTFKKQGPPTPLINSINGHSSSQHIDEAGNNSRHQCCIGLKSNGIKQNRCIEHYDINASELLEEWDHDGHCEMGSVLSLKQVLPRVFDLLRCLTCRDKIIEFCIDLFHSSDFLQLLSGFLVVASCDHGIGSAISDKYSGTDWLQNPIPKPSKMRPKINIQTYWEKALIKAPARKTRPPKSMEILRPNLRVIVEATKLDNSAARYKDDVNEVNT 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2334 921 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 284 328 IPR000225 GO:0005515
Sto13g2334 921 Gene3D - 161 569 IPR011989 -
Sto13g2334 921 SMART arm_5 190 231 IPR000225 GO:0005515
Sto13g2334 921 SMART arm_5 232 272 IPR000225 GO:0005515
Sto13g2334 921 SMART arm_5 358 401 IPR000225 GO:0005515
Sto13g2334 921 SMART arm_5 273 315 IPR000225 GO:0005515
Sto13g2334 921 SMART arm_5 316 356 IPR000225 GO:0005515
Sto13g2334 921 SMART arm_5 445 485 IPR000225 GO:0005515
Sto13g2334 921 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 14 571 - -
Sto13g2334 921 MobiDBLite consensus disorder prediction 592 611 - -
Sto13g2334 921 Pfam Armadillo/beta-catenin-like repeat 446 481 IPR000225 GO:0005515
Sto13g2334 921 MobiDBLite consensus disorder prediction 649 665 - -
Sto13g2334 921 MobiDBLite consensus disorder prediction 649 684 - -
Sto13g2334 921 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 14 571 - -
Sto13g2334 921 SUPERFAMILY ARM repeat 171 561 IPR016024 -
Sto13g2334 921 MobiDBLite consensus disorder prediction 666 681 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2334 144 441 U-box Gene Family AT2G23140 25.329 2.71e-13 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2334 - - gmx:100809382 853.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2334 13 29913598 29918958 Sto13g2334 13 29913598 29918958 CCT