Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2329 ATGCAGGGTTTCACTTTCTATGAGCGAGTTTCTAAGGCTTTCCATCACTCCTCCACTCTTTCTAAGCTTGTACTCCTCTTCACCGTAAGTGGTGGGACAGGGGCACTAGTGGCATATGCGGATGCAAATCAAGGCAATGGAGGAGCATACATTGGTTCATCAGAAACAGTTCcggaaaagaaaaaagtggTAGTGCTGGGAACTGGCTGGGGAAGCACAAGTTTCTTGAGGAATCTGAACAACGCAAAGTATGAGGTTCAAGTGGTGTCGCCTCGTAATTATTTCGCATTCACTCCTTTGTTGCCTAGCGTCACCAGCGGTACTGTCGAAGCTCGCAGTATTGTTGAACCTATTCGTAATATCTTTAGGAAGAAAAAGATGGAAATCCTATTCAGCGAAGCAGAGTGCTTCAAGATTGATgcacaaaacaagaaaatctactGTCGATCTAATAAAACCAACAATTTGAACGGGAAAGAAGAATTTGTGGTAGACTATGACTACCTGATCGTAGGCGTGGGTGCTAATGTCAACACATTCAATACTCCAGGAGTAGAGGAGCATTGCCATTTCTTGAAGGAAGTAGAAGATGCTCAGAAGATTCGGAGAACAGTTATTGACTGCTTTGAGAGAGCAAGCTTGCCAGAAATaagtgaagaagagaagaagagaattcTTCATTTTGCTATTGTTGGTGGTGGTCCAACCGGAGTGGAGTTTGCAGCCTCTCTTCATGACTTTGTCAATGAGGATTTGGTCAGGTTATATCCTGGAATAAAGGACTTCGTTAAAATCACACTTCTGGAGGCAGGGGATCATATTCTGAGCATGTTTGACAAGAGGATTACCGCATTTGCTGAAGACAAGTTTAACAGAGAGGGTATTGATGTGAAAACAGGGTCCATGGTTGTGAAGGTGTCGGAAAAAGAAATTTCTACTAAGGAACTGAAAAATGGAGGAGAGATTACTACAACTCCATATGGAATGGCTGTGTGGTCAACTGGCATAGGCACTCGTCCATTCATCAAAGACTTTATGAAGGAAATTAACCAGGCTAACAGGCGCGCCTTGGCTACCGATGAATGGTTGAGAGTTGAAGGATGCGATAATGTGTATGCTCTTGGTGATTGTGCTACAATAAACCAGAGAAAAGTCATGTTATTAAGTTCAGTGATGTCAAAGGCAGGCGCTGAGGCGAGGCGAAATTTCTGTCCAGCGCCTCTTGAACCTCAAGAGGCGCTGGCTTCAGAAGATATTTCAGCAATTTTCAAGAAAGCTGACAAACACAATTCAGGAACACTTACAGTGAAAGAATTTGAAGAGGTGATTAAGGACATCTGTGAAAGGTACCCTCAGGTGGAGCTATATTTGAAGAGCAAGCAGATGCGCAGCATCGTTGATCTTTTGAAGGAAGCCAAGGGAGATGTTAAGAAAGAAACAATTGAACTGAACATCGAAGAACTCAAAACAGCATTTTCTAAAGTGGACTCTCAAATGAAATTTCTTCCTGCTACAGCACAGGTTGCGTCTCAGCAAGGCACCTACTTGGCCAAGTGTTTTAATAGGATGGAAGAGTGTGAAAAGAATCCAGAGGGTCCTATCAGATTCAGGGCAGAGGGTCGCCATCGCTTCAAACCCTTTAGGTACAAGCATTTGGGACAATTCGCTCCTCTGGGAGGAGAGCAGACAGCAGCACAGCTTCCAGGGGATTGGGTATCAATTGGTCACAGTTCCCAATGGTTATGGTATTCTGTGTATGCAAGCAAGCAAGTAAGCTGGCGTACTAGAGCGTTGGTTGTATCAGACTGGACAAGACGTTTCGTCTATGGGAGGGACTCAAGTCGCATCTAA 1851 0.4273 MQGFTFYERVSKAFHHSSTLSKLVLLFTVSGGTGALVAYADANQGNGGAYIGSSETVPEKKKVVVLGTGWGSTSFLRNLNNAKYEVQVVSPRNYFAFTPLLPSVTSGTVEARSIVEPIRNIFRKKKMEILFSEAECFKIDAQNKKIYCRSNKTNNLNGKEEFVVDYDYLIVGVGANVNTFNTPGVEEHCHFLKEVEDAQKIRRTVIDCFERASLPEISEEEKKRILHFAIVGGGPTGVEFAASLHDFVNEDLVRLYPGIKDFVKITLLEAGDHILSMFDKRITAFAEDKFNREGIDVKTGSMVVKVSEKEISTKELKNGGEITTTPYGMAVWSTGIGTRPFIKDFMKEINQANRRALATDEWLRVEGCDNVYALGDCATINQRKVMLLSSVMSKAGAEARRNFCPAPLEPQEALASEDISAIFKKADKHNSGTLTVKEFEEVIKDICERYPQVELYLKSKQMRSIVDLLKEAKGDVKKETIELNIEELKTAFSKVDSQMKFLPATAQVASQQGTYLAKCFNRMEECEKNPEGPIRFRAEGRHRFKPFRYKHLGQFAPLGGEQTAAQLPGDWVSIGHSSQWLWYSVYASKQVSWRTRALVVSDWTRRFVYGRDSSRI 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2329 616 SUPERFAMILY FAD/NAD(P)-binding domain 227 381 IPR036188 -
Sto13g2329 616 SUPERFAMILY EF-hand 416 503 IPR011992 -
Sto13g2329 616 Gene3D - 459 615 - -
Sto13g2329 616 Gene3D - 53 446 - -
Sto13g2329 616 Pfam Pyridine nucleotide-disulphide oxidoreductase 61 387 IPR023753 GO:0016491
Sto13g2329 616 ProSiteProfiles EF-hand calcium-binding domain profile. 414 449 IPR002048 GO:0005509
Sto13g2329 616 PANTHER NAD(P)H DEHYDROGENASE B2 3 396 - -
Sto13g2329 616 PANTHER NAD(P)H DEHYDROGENASE B2 416 616 - -
Sto13g2329 616 SUPERFAMILY FAD/NAD(P)-binding domain 60 279 IPR036188 -
Sto13g2329 616 PRINTS FAD-dependent pyridine nucleotide reductase signature 26 45 - -
Sto13g2329 616 PRINTS FAD-dependent pyridine nucleotide reductase signature 166 184 - -
Sto13g2329 616 PRINTS FAD-dependent pyridine nucleotide reductase signature 227 245 - -
Sto13g2329 616 PANTHER NADH DEHYDROGENASE 3 396 IPR045024 GO:0003954|GO:0006116
Sto13g2329 616 PANTHER NADH DEHYDROGENASE 416 616 IPR045024 GO:0003954|GO:0006116
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2329 Sto-Chr13 29888547 29892488 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2329 1 616 Chloroplast and Mitochondria Gene Families AT4G21490 68.982 0.0 863
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2329 K03885 - gmx:100802661 969.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2329 13 29888547 29892488 Sto13g2329 13 29888547 29892488 CCT