Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2216 atggaaGAAGATACCAATTCATGGTTAAGGAGGACGAAATTCTCTCACACTGTGTGTCATCGATTGGACTCCAAGAGATTGGCCTCCATTCCTCTACGCATTGAGGGGGCAGAAGGCAATTCAGCTGCTCCGAAGATTCAGCAAAATCCCAATGTCAAGAAGCCAAGATCTGTGTCTCCTTTTCCTCAAACCCCTCTCTCTGAGACCTTCAGGGAAGCTAAGTCTGAACAGAAGAGGTACTCAACGCCAGGTCCTCGCAGGAGAAATAAGGATTCTCGAGAGGGTGTGGTCAAACCATCCACCAATTCGAAATCGCCGACAAAAAGTCCGACCAAGCACTCAAAATCGAGTGATCATCATGGGAAGAATCGGAAGGAATCAGGGTGGACCAAGTATTTTGACAACGGAGGAGGAAGAGTCACTGCTGTGGAAACTGCAGAAGAATGGACAGTTGACAGATCTCAGCTGTTTTTTGGGCTTAGGTTTGCTCATGGAGCTCATAGCAGGCTGTATCGTGGTAACTATAAGGATGAACCTGTTGCTATTAAGCTTATTAGGGTACCAGATGAGGATGGAAATGGAGAACTGGCTACTAGGTTAGAGAAACAATTCATTAGGGAAGTCACACTCCTTTCACGTCTCCACCATCAAAATGTTATAAAGTTTGTTGCGGCATGCAGAACACCACCTGTTTATTGTGTGATCACAGAATATTTGTCAGAAGGTTCATTGAGGGCATACATGCATAAGATAGACCGcaaatttttttctctacaAGAGCAAGTGGCTTTTGCTTTAGACATTGCTCGTGGAATGGAATATATACACTCTCAAGGTATCATTCATCGAGACCTCAAACCAGAGAATGTCCTTATCAGTGAAGAGTTCCGCCTCAAAATTGCTGATTTTGGCATTGCTTGTGAGGAGGCATACCGTGAAGTATTTGATGACGGTCCTGGTACATACCGTTGGATGGCACCTGAAATGATCAAACGTAAATCCTATGGGAGAAAGGTTGATGTGTATAGTTTTGGGCTCATCCTATGGGAGATAGTGACTGGATCAATCCCATATGAGGATATGAATCCCGTTCAGGCTGCTTACGCCGTGCTAAATAAGCATTCAAGGCCTACTATTCCTTCAAGCTGCCCACCTGCTATGGGAGCTTTAATTGAGCAATGTTGGTCGCAACAACCCGATAAGAGGCCCGATTTCTGGCAGATTGTTAAGGTATTAGAACAATTTGAGTCTTCACTTGCCCATGATGGAACTCTGAATTTTGTACAAAACCCGATTTGCCAAGACCATAAGAAAGGGCTTCTTCATTGGATTCAAAAGCTAGGTCCTGTGCATCAAAATAGCCCTGTGCCCAAACCAAAGTTTACGTGA 1389 0.4392 MEEDTNSWLRRTKFSHTVCHRLDSKRLASIPLRIEGAEGNSAAPKIQQNPNVKKPRSVSPFPQTPLSETFREAKSEQKRYSTPGPRRRNKDSREGVVKPSTNSKSPTKSPTKHSKSSDHHGKNRKESGWTKYFDNGGGRVTAVETAEEWTVDRSQLFFGLRFAHGAHSRLYRGNYKDEPVAIKLIRVPDEDGNGELATRLEKQFIREVTLLSRLHHQNVIKFVAACRTPPVYCVITEYLSEGSLRAYMHKIDRKFFSLQEQVAFALDIARGMEYIHSQGIIHRDLKPENVLISEEFRLKIADFGIACEEAYREVFDDGPGTYRWMAPEMIKRKSYGRKVDVYSFGLILWEIVTGSIPYEDMNPVQAAYAVLNKHSRPTIPSSCPPAMGALIEQCWSQQPDKRPDFWQIVKVLEQFESSLAHDGTLNFVQNPICQDHKKGLLHWIQKLGPVHQNSPVPKPKFT 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2216 462 PANTHER TYROSINE KINASE FAMILY PROTEIN 3 438 - -
Sto13g2216 462 SUPERFAMILY Protein kinase-like (PK-like) 142 412 IPR011009 -
Sto13g2216 462 MobiDBLite consensus disorder prediction 71 97 - -
Sto13g2216 462 MobiDBLite consensus disorder prediction 35 135 - -
Sto13g2216 462 Gene3D Phosphorylase Kinase; domain 1 144 240 - -
Sto13g2216 462 Gene3D Transferase(Phosphotransferase) domain 1 241 440 - -
Sto13g2216 462 MobiDBLite consensus disorder prediction 111 129 - -
Sto13g2216 462 CDD STKc_MAP3K-like 163 412 - -
Sto13g2216 462 PRINTS Tyrosine kinase catalytic domain signature 236 249 IPR001245 GO:0004672|GO:0006468
Sto13g2216 462 PRINTS Tyrosine kinase catalytic domain signature 274 292 IPR001245 GO:0004672|GO:0006468
Sto13g2216 462 PRINTS Tyrosine kinase catalytic domain signature 320 330 IPR001245 GO:0004672|GO:0006468
Sto13g2216 462 PRINTS Tyrosine kinase catalytic domain signature 339 361 IPR001245 GO:0004672|GO:0006468
Sto13g2216 462 PRINTS Tyrosine kinase catalytic domain signature 383 405 IPR001245 GO:0004672|GO:0006468
Sto13g2216 462 ProSiteProfiles Protein kinase domain profile. 156 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2216 462 Pfam Protein tyrosine and serine/threonine kinase 162 412 IPR001245 GO:0004672|GO:0006468
Sto13g2216 462 MobiDBLite consensus disorder prediction 42 70 - -
Sto13g2216 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 280 292 IPR008271 GO:0004672|GO:0006468
Sto13g2216 462 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 3 438 - -
Sto13g2216 462 SMART serkin_6 156 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2216 Sto-Chr13 29014578 29016940 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2216 1 462 MAP Kinase Kinase Kinase AT5G58950 53.992 0.0 554
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Sto13g2216 PK_Tyr_Ser-Thr 8.3e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2216 - - gmx:547826 681.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2216 13 29014578 29016940 Sto13g2216 13 29014578 29016940 CCT