Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2202 ATGGAAGAGAGTTCTACTTCAGGTTATAAGGATTATGTGGCCGGTTTGATTGCTGGGGTTGCCACTGTTGCTACGGGCCATCCCTTCGACACAGTCAAGgTGAAGCTGCAAAAACACAATGCAGAGGCACATATAATTCGATATAGGAGTGGTTTACATTGCACTGCTAGGATACTAAAGACTGAAGGGGTTAGAGGACTTTATAGAGGAGCAACATCATCTTTTATTGGAATGGCTTTTGAAAGCTCACTTCTTTTTGGCATTTATTCCCGGACAAAAGTAGCCCTCCAGGGTGGTGTGCCTAGTAGTGTACCTCAGCCTCAAGTAATAATACCATCTGCAGCGTACAGTGGTGCCATCATCAGTTTTGTGTTATGCCCATCAGAGCTAGTGAAGTGTAGGATGCAGATCCAAGGCACCGACTCTTTGGTTCCCAAGTCCAGTAGATACAGTGGTCCTCTTGACTGTGCccttaaaactattaaaaacgAAGGGGTTGCGGGAATCTTTCGTGGTGGTTGTACAACATTGCTTAGAGAATCTATAGGAAATGCTGTTTTTTTCAGTGTTTATGAACATGTGCGTTATCACATGCGTTCACAAATTAAAGCTGCCTCATCCAATGACAGCAACTTGATCGACATGGGAATTGGGATCGTTACTGGAGGCCTTGCTGGTGTAGCTTTTTGGTTGGCTGTTTTGCCCCTGGACGTGGCAAAAACCATAATTCAGACTAACCCGGATAAAAACTGTCCAAGGAATCCTTTTCAAGTCTTGAGTCCTGTTTACAAGAGGGCTGGATTAAAGGGGTGCTATACAGGGCTGGGTCCTACAGTAGCTCGAGCGTTCCCTGCTAATGCAGCTGCTATAGTCACCTGGGAGATGGCAATGAAAATGTTAGGCATCAAGCATGACTAA 918 0.4434 MEESSTSGYKDYVAGLIAGVATVATGHPFDTVKVKLQKHNAEAHIIRYRSGLHCTARILKTEGVRGLYRGATSSFIGMAFESSLLFGIYSRTKVALQGGVPSSVPQPQVIIPSAAYSGAIISFVLCPSELVKCRMQIQGTDSLVPKSSRYSGPLDCALKTIKNEGVAGIFRGGCTTLLRESIGNAVFFSVYEHVRYHMRSQIKAASSNDSNLIDMGIGIVTGGLAGVAFWLAVLPLDVAKTIIQTNPDKNCPRNPFQVLSPVYKRAGLKGCYTGLGPTVARAFPANAAAIVTWEMAMKMLGIKHD 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2202 305 Gene3D Mitochondrial carrier domain 113 305 IPR023395 -
Sto13g2202 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 6 95 IPR018108 -
Sto13g2202 305 Pfam Mitochondrial carrier protein 113 197 IPR018108 -
Sto13g2202 305 Pfam Mitochondrial carrier protein 219 301 IPR018108 -
Sto13g2202 305 Pfam Mitochondrial carrier protein 8 97 IPR018108 -
Sto13g2202 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 105 197 IPR018108 -
Sto13g2202 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 299 IPR018108 -
Sto13g2202 305 SUPERFAMILY Mitochondrial carrier 7 294 IPR023395 -
Sto13g2202 305 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 5 132 - -
Sto13g2202 305 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 132 304 - -
Sto13g2202 305 PANTHER - 5 132 - -
Sto13g2202 305 PANTHER - 132 304 - -
Sto13g2202 305 Gene3D Mitochondrial carrier domain 2 112 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2202 Sto-Chr13 28878882 28883294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2202 25 300 Antiporters AT1G79900 30.496 2.13e-36 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2202 K15109 - gmx:100815087 511.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2202 13 28878882 28883294 Sto13g2202 13 28878882 28883294 ECH