Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2185 aTGGGTGTGGATTACTATAAGATTTTGCAGGTGGACAAGAGTGCCTCCGATGAAGATTTGAAGAAAGCCTACAGAAAGCTTGCTATGAAATGGCACCCTGATAAGAATCCAAACAACAAGAAAGAGGCCGAGGCCAAATTCAAAGAGGTCTCTGAAGCCTACGAGGTTCTAAGTGACCCTCAGAAGAGAGCGATTTATGATCAATATGGAGAAGAAGGGCTCAAAGGGCAGGTGCCACCACCCGGTGCTGGAGGAGCTTCCTTCTTCCAAACTGGAGATGGCCCAACCACGTTTAGGTTTAACCCCAGAAATGCAGACGACATTTTTGCTGAATTTTTCGGGTTTTCAAGCCCATTTGGGGGAATGGGAGGTGGTGCTGGAGGTGGCATGAGGGGTGGTCCAAGGTCCTTTGGTGGAATGTTTGGGGATGACATATTCAGTTCATTTGGAGAAGGAAGGCCTATGAGTCAGGGTCCACGCAAGGCACCTCCCATTGAAAAGACACTACCTTGCACCCTGGAGGAGCTCTATAAGGGGACTACCAAGAAGATGAAGATCTCAAGGGAACTTGTAGATGCCAGCGGGTAA 588 0.4864 MGVDYYKILQVDKSASDEDLKKAYRKLAMKWHPDKNPNNKKEAEAKFKEVSEAYEVLSDPQKRAIYDQYGEEGLKGQVPPPGAGGASFFQTGDGPTTFRFNPRNADDIFAEFFGFSSPFGGMGGGAGGGMRGGPRSFGGMFGDDIFSSFGEGRPMSQGPRKAPPIEKTLPCTLEELYKGTTKKMKISRELVDASG 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2185 195 Pfam DnaJ domain 4 67 IPR001623 -
Sto13g2185 195 Gene3D DnaJ domain 3 127 IPR036869 -
Sto13g2185 195 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Sto13g2185 195 SMART dnaj_3 3 62 IPR001623 -
Sto13g2185 195 CDD DnaJ 4 59 IPR001623 -
Sto13g2185 195 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 195 - -
Sto13g2185 195 Gene3D - 154 194 - -
Sto13g2185 195 PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 13-LIKE 1 195 - -
Sto13g2185 195 MobiDBLite consensus disorder prediction 148 167 - -
Sto13g2185 195 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Sto13g2185 195 PRINTS DnaJ domain signature 6 24 IPR001623 -
Sto13g2185 195 PRINTS DnaJ domain signature 24 39 IPR001623 -
Sto13g2185 195 PRINTS DnaJ domain signature 42 62 IPR001623 -
Sto13g2185 195 PRINTS DnaJ domain signature 62 81 IPR001623 -
Sto13g2185 195 SUPERFAMILY Chaperone J-domain 3 125 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2185 Sto-Chr13 28751223 28751939 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2185 5 74 C2H2 Transcription Factor Family AT1G74250 40.541 8.91e-12 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2185 K09510 - qsu:112026069 298.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2185 13 28751223 28751939 Sto13g2185 13 28751223 28751939 ECH