Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2179 ATGGCCGGTCATATAGATATTGGAGAATCAAAAGCAAACAATGGTCTCTACCTCCACCAGTTCAAGCTCTCCCTCGACGACCCCGACTCCTCCCTCTCCTCCTGGAACGACCGCGACGCCCACCCCTGCTCCTGGACCGGCGTCACCTGCGACTCCACCAACACCTCCGTCACCCAACTCGACCTCTCCAGCTCCAACCTCTACGGTCCATTCCCTGCCTCCATTCTCTGCCGTCTCACCAACCTCACTTCCCTCACTCTCTCAAACAACTCCATCAACGACACCCTCCCTTCCGAAATCTCCCTCTGTCGAAACCTTCTTCACCTTGACCTCTCCCAGAACCTCCTCACCGGTCCTCTCCCCCCCACGTTATCCGACCTTCCCAACCTCAGGTACCTCGACTTGACCGGAAATAACTTCTCCGGCCCCATCCCCGACTCCTTTGGCCGCTTTCAGAATCTCGAGGTTATCTCCCTTGTATACAACCTTCTAGACGGGACAATACCCGCTTCTCTCGGAAACATTACTACCCTCAAGATGCTTAACCTCTCTTACAACCCCTTTCTCCCGGGTCCCATCCCGCCGGAGCTCGGGAACCTAACGAATCTTGAAATCATGTGGCTCACGCAGTGTAACTTAGTGGGCGTGATTCCTGATTCCTTCGGTAGGTTGAAGAAACTCTTGGATTTGGACCTGGCATTGAACAATCTATACGGTTCTGTTCCCGGTTCTCTCACGGAGATGACGAGCTTGAAGCAAATTGAGCTGTATAACAACTCGTTGTCCGGTGAGTTGCCTCAGGGATGGGGGAATCTCACCGCATTGAGGCTTGTCGACGTGTCCATGAACCATTTGACGGGGAAGATTCCGGACGAGTTGTGTTGGCTGCCGCTGGAGAGTCTTAACCTTTACCAGAATCATTTCGAGGGCGAGTTGCCGGAGAGTATTGCCGACTCACCGAATCTCTATGAACTCAGGTTGTTTGGTAATAGACTCGCCGGGAAACTGCCGAGTAATCTCGGGAAGAATGCTCCTATAAGGTGGCTTGACGTGTCGGGCAACCAGTTCTCAGGTGAAATTCCGGCGACTCTGTGTGACAATCGGAAATTGGAGGAGCTACTGATGATAAACAACTTGTTTTCCGGTGAGATCCCGGCGAGTTTAGGCAGTTGCCGGAGTTTGATGCGTGTCCGGCTGGGGTTCAACCGGCTCTCCGGCGAAGTTCCGCCGGCTATTTGGGGGCTTCCGCATGTGTATCTGCTTGAGCTTATAGATAACTCGTTTTCTGGTTCAATCGCCAAAACTATTGCTGGCGCGGGGAACCTATCGTTGTTGATTCTATCGAAGAACAATTTCACAGGATCGATCCCTGATGAGATTGGATGGCTGGAAAATCTTGAGGAATTCTCTGGTAACGATAATATGTTTAATGGGTCACTTCCTGGTAGTATAGTGAATCTTAGGCAGCTTGGGACTCTTGATCTTCACAACAACAAACTCTCTGGGGAGCTTCCTAAGGAAGTTCGAACCTGGGAGAAGCTCAATGAGTTGAATCTGGCAAATAATGAGATTGGTGGAAATATTCCTGACGAATTTGGAAGCTTGTCCGTGTTAAATTTTCTTGATCTGTCTAATAATCAGTTTTCCGGCAAAGTTCCTCTTGGGTTGCAGAATTTGAAGCTGAATAGGTTGAATATGTCTTACAATCAACTCTCTGGAGAACTTCCTCCTATGTTGGCTAAGGAAATGTACAGGACTAGTTTTCTGGGGAACCCTGGTTTATGTGGGGATTGGAATGGCTTATGTAATGCCAAAGATGAAGCGAAGGATGCTGGTTATTCTTGGTTGCTTCGAACTATTTTCATAGTTGCCACTGTGGTGTTTGTTGTCGGCGTGGTCTGGTTCTATTTCAAGTATAGGAACTTCAAAAAGGCGAAAAGATCTATCGACAAATCTAAATGGACATTGATGTCATTCCATAAACTGGGTTTTAGTGAAGATGAGATTTTGAACTGCCTTGATGATGATAGTTTGATAGGAAGTGGATCATCAGGGAAAGTTTACAAGGTCGTTCTCAGCAACGGGGAAGCTGTTGCCGTAAAGAAGCTATGGGGAGGCATAAGAAAGGATATGGAGAGTGGAGATGTTGAAAAAGGTGGGTCTCATGACAATGCTTTTGATGCAGAAGTTGAAACTTTGGGCAAAATTAGGCACAAGAACATTGTCAAGCTTTGGTGTAGCTGCACCACTAGGGACTGCAAGCTCTTGGTTTATGAGTACATGCCAAATGGTAGTCTTGGTGATTTGCTTCACAGCAGTAAGGGAGGATTGTTGGATTGGCCAACTAGGTATAAGATAACTGTTGATGCTGCAGAAGGCCTCTCCTATCTGCATCATGATTGTGTTCCCCCAATTGTTCATAGAGATGTGAAATCCAACAATATCCTCTTGGATAGCGATTTTGGTGCGAGGGTGGCCGATTTTGGCGTAGCCAAGGTTGTTGAAACCACAGCAAGAGGAACCAAATCCATGTCTGTCATTGCTGGCTCCTGCGGATACATTGCACCAGAATATGCATACACGCTGAGGGTGAATGAGAAGAGTGACATATACAGTTTTGGTGTCGTGATACTAGAATTGGTGACTGGAAGACGCCCAATGGACCCAGAGTTTGGAGAAAAGGACTTGGTGAAGTGGGTTTGCATCACCTTAGATCAGAAAGGAGTGGATCATGTTATTGACTCAAGGCTTGATTCTTGTTACAAAGACGATATCCGCAAGGTCCTCAACATCGGCCTCATGTGCACGAGTCCTCTTCCAATCAACCGCCCGGCCATGAGAAGGGTGGTCAAGATGCTGCAGGAGATGGGCTCAGAGAACCAAACCAAGCTTATCAAGAAAGATGGAAAATTGTCACCTTATTACTGTGATGATGCCTCAGATCAAGCAAGTGTAGCCTAA 2961 0.4779 MAGHIDIGESKANNGLYLHQFKLSLDDPDSSLSSWNDRDAHPCSWTGVTCDSTNTSVTQLDLSSSNLYGPFPASILCRLTNLTSLTLSNNSINDTLPSEISLCRNLLHLDLSQNLLTGPLPPTLSDLPNLRYLDLTGNNFSGPIPDSFGRFQNLEVISLVYNLLDGTIPASLGNITTLKMLNLSYNPFLPGPIPPELGNLTNLEIMWLTQCNLVGVIPDSFGRLKKLLDLDLALNNLYGSVPGSLTEMTSLKQIELYNNSLSGELPQGWGNLTALRLVDVSMNHLTGKIPDELCWLPLESLNLYQNHFEGELPESIADSPNLYELRLFGNRLAGKLPSNLGKNAPIRWLDVSGNQFSGEIPATLCDNRKLEELLMINNLFSGEIPASLGSCRSLMRVRLGFNRLSGEVPPAIWGLPHVYLLELIDNSFSGSIAKTIAGAGNLSLLILSKNNFTGSIPDEIGWLENLEEFSGNDNMFNGSLPGSIVNLRQLGTLDLHNNKLSGELPKEVRTWEKLNELNLANNEIGGNIPDEFGSLSVLNFLDLSNNQFSGKVPLGLQNLKLNRLNMSYNQLSGELPPMLAKEMYRTSFLGNPGLCGDWNGLCNAKDEAKDAGYSWLLRTIFIVATVVFVVGVVWFYFKYRNFKKAKRSIDKSKWTLMSFHKLGFSEDEILNCLDDDSLIGSGSSGKVYKVVLSNGEAVAVKKLWGGIRKDMESGDVEKGGSHDNAFDAEVETLGKIRHKNIVKLWCSCTTRDCKLLVYEYMPNGSLGDLLHSSKGGLLDWPTRYKITVDAAEGLSYLHHDCVPPIVHRDVKSNNILLDSDFGARVADFGVAKVVETTARGTKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRRPMDPEFGEKDLVKWVCITLDQKGVDHVIDSRLDSCYKDDIRKVLNIGLMCTSPLPINRPAMRRVVKMLQEMGSENQTKLIKKDGKLSPYYCDDASDQASVA 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2179 986 Gene3D Ribonuclease Inhibitor 299 605 IPR032675 -
Sto13g2179 986 ProSiteProfiles Protein kinase domain profile. 673 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2179 986 ProSitePatterns Serine/Threonine protein kinases active-site signature. 805 817 IPR008271 GO:0004672|GO:0006468
Sto13g2179 986 Pfam Leucine rich repeat 80 140 IPR001611 GO:0005515
Sto13g2179 986 Pfam Leucine rich repeat 202 261 IPR001611 GO:0005515
Sto13g2179 986 SMART LRR_typ_2 127 150 IPR003591 -
Sto13g2179 986 SMART LRR_typ_2 200 223 IPR003591 -
Sto13g2179 986 SMART LRR_typ_2 248 271 IPR003591 -
Sto13g2179 986 SMART LRR_typ_2 487 511 IPR003591 -
Sto13g2179 986 SMART LRR_typ_2 272 296 IPR003591 -
Sto13g2179 986 SMART LRR_typ_2 79 103 IPR003591 -
Sto13g2179 986 SMART LRR_typ_2 535 558 IPR003591 -
Sto13g2179 986 Gene3D Ribonuclease Inhibitor 13 188 IPR032675 -
Sto13g2179 986 SUPERFAMILY Protein kinase-like (PK-like) 668 954 IPR011009 -
Sto13g2179 986 PANTHER LRR RECEPTOR-LIKE KINASE 12 967 - -
Sto13g2179 986 Pfam Leucine rich repeat N-terminal domain 16 51 IPR013210 -
Sto13g2179 986 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 12 967 - -
Sto13g2179 986 ProSiteProfiles Leucine-rich repeat profile. 81 103 IPR001611 GO:0005515
Sto13g2179 986 SMART serkin_6 673 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2179 986 Pfam Protein kinase domain 676 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2179 986 Gene3D Phosphorylase Kinase; domain 1 657 760 - -
Sto13g2179 986 ProSitePatterns Protein kinases ATP-binding region signature. 679 702 IPR017441 GO:0005524
Sto13g2179 986 Gene3D Ribonuclease Inhibitor 189 298 IPR032675 -
Sto13g2179 986 SUPERFAMILY RNI-like 60 406 - -
Sto13g2179 986 Gene3D Transferase(Phosphotransferase) domain 1 761 979 - -
Sto13g2179 986 SUPERFAMILY L domain-like 347 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2179 Sto-Chr13 28670679 28684668 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2179 13 986 Receptor kinase-like Gene Family AT1G28440 70.031 0.0 1409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto13g2179 Pkinase 1.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2179 - - gmx:100819887 1558.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2179 13 28670679 28684668 Sto13g2179 13 28670679 28684668 ECH