Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2178 ATGAACCATCCCACCAATATTGCTTACGATTTGGTCATGCTTTTTCTCTCCATATCCTTCTTCATCCTCACCATAGTCCTCTTCCTCGCTTGCAAGAAGATCAGACCAATAGAATCCGAGGAAACCCTCCCCGTCAAAATCTCCGCTCGCCCATACCCATTGACGGACATCGACGCCGCCACCGACGGCTTCAGCCACCGTAGAATCGTCGGGAAGGGGCGCCTCGGGACGGTTTACGCCGGGTTACTATCCGAAACAGCGGTGGTGGCTATTAAAAGGATTCACCCTTCGCTTGTCCTGAGCAATGTGGGGCCTGGATTTTCCTCTGTTCTGAAATGGCTCTCTCTGGCCCAGCACCCCAACATCGTCCCCATCATGGGCTTCTCCGAAGCACCGGGGGAGAGAATCGTAGTGATGGAATTCGTGAGAATGGCGAGCCTAGATTTCTACCTGCATCAAAACCCACAAGGGGCTTCGCTTCTGGATTGGAGCCAGAGGTTCAGGATCGCAGCCGGAGCAGCCAGAGGGCTCGAGTATCTTCACCAAGTGGTGGCACCAACCATAGTTCATGGCTGTGTCAAGTCCTCCAATATTCTGATCGATGTCAATTTCTGTGCGAGGGTTTGTGATTATGGGCTTAATTTTTTGGCACCGAAGGAGAATAAGAGGGGGATTTTGGGGTATGTGGATGAGGAGTATTGGGATTCGTATGGGGGAAGTAAGGAAAGTGATGTGTATGGGTTAGGAGTGGTTTTGTTGGAgattttgagtgggagaagttgTGAGGAAGGAATGCTGGCAAAGTGGGCATTGCCTTTgataaaagaaatgagatatACAGAAGTTTTGGACCCAAGATTGGTGATTCCTTCTGACTTGAAGCCTCTTGTTAGATTGGCTAAAGTTGCTTCGGCTTGTGTTGGTAATTCTAGGAAATGTAGGCCGTCTATTGCTCATGTGGCTACCATTTTGAACAATTTGGAGAGTCAAGTATGCATTTGA 1002 0.477 MNHPTNIAYDLVMLFLSISFFILTIVLFLACKKIRPIESEETLPVKISARPYPLTDIDAATDGFSHRRIVGKGRLGTVYAGLLSETAVVAIKRIHPSLVLSNVGPGFSSVLKWLSLAQHPNIVPIMGFSEAPGERIVVMEFVRMASLDFYLHQNPQGASLLDWSQRFRIAAGAARGLEYLHQVVAPTIVHGCVKSSNILIDVNFCARVCDYGLNFLAPKENKRGILGYVDEEYWDSYGGSKESDVYGLGVVLLEILSGRSCEEGMLAKWALPLIKEMRYTEVLDPRLVIPSDLKPLVRLAKVASACVGNSRKCRPSIAHVATILNNLESQVCI 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2178 333 Gene3D Phosphorylase Kinase; domain 1 29 141 - -
Sto13g2178 333 Pfam Protein tyrosine and serine/threonine kinase 67 322 IPR001245 GO:0004672|GO:0006468
Sto13g2178 333 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 2 332 - -
Sto13g2178 333 SUPERFAMILY Protein kinase-like (PK-like) 41 324 IPR011009 -
Sto13g2178 333 Gene3D Transferase(Phosphotransferase) domain 1 143 332 - -
Sto13g2178 333 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 2 332 - -
Sto13g2178 333 ProSiteProfiles Protein kinase domain profile. 64 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2178 Sto-Chr13 28666085 28667086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2178 33 331 Receptor kinase-like Gene Family AT3G59420 40.385 1.04e-59 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Sto13g2178 PK_Tyr_Ser-Thr 4.1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2178 - - gmx:100808319 528.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2178 13 28666085 28667086 Sto13g2178 13 28666085 28667086 CCT
Sto13g2178 13 28666085 28667086 Sto13g2178 13 28666085 28667086 ECH