Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2177 atgACATGGTGCAATGAGTCTGAAGATCATGAAAGGGGGATTCATCAAATACGTGACGTCACACCCACCCCCCTTATAACTCCTCCTTCACCAAAATCCTCTCAAGATCAAAATGGAATCGTCACTTGCCCTTCATGCGGCCATACCCTAGAATTCCAAGATCAGggcggAATTCATGAGTTGCCGGGGCTGCCAGCTGGAGTGAAGTTCGATCCGAATGACCAAGAGATATTAGAGCATTTAGAGGGGAAGGTTGTGTGTGATGTACGCAAGCTTCATCCTCTTATTGATCAGTTCATTCCAACTCTTGAAGGCGAGAATGGAATCTGTTATACACACCCAGAAAAGCTACCAGATTCGGCACTTCTTTCACAGGCCATCAAAGGCATACACAACGGGGACAAGGAAGAGAAGAAAAGTGCAGACAGAGGAAGAAGGAAGCGAGACAAGATGGCACAAGACAGGCAAAACCAGAGCAGTGTTTGTGAATGGAGAAGTGAAAGGGTTCAAGAAGATTCTAGTCCTCTACACCAACtatgggaggaagaggaagccCGAGAAGACAAGCTGGGTGATGCATCAGTACCACCTCGGAGGCaacgaagaagagagagaaggagagctAGTGGTGTCCAAGGTTTTCTTCCAGACACAGCCAAGACAATGtgctaa 672 0.4286 MTWCNESEDHERGIHQIRDVTPTPLITPPSPKSSQDQNGIVTCPSCGHTLEFQDQGGIHELPGLPAGVKFDPNDQEILEHLEGKVVCDVRKLHPLIDQFIPTLEGENGICYTHPEKLPDSALLSQAIKGIHNGDKEEKKSADRGRRKRDKMAQDRQNQSSVCEWRSERVQEDSSPLHQLWEEEEAREDKLGDASVPPRRQRRRERRRASGVQGFLPDTAKTMC 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2177 223 Pfam No apical meristem (NAM) protein 65 148 IPR003441 GO:0003677|GO:0006355
Sto13g2177 223 MobiDBLite consensus disorder prediction 128 223 - -
Sto13g2177 223 SUPERFAMILY NAC domain 59 122 IPR036093 GO:0003677|GO:0006355
Sto13g2177 223 MobiDBLite consensus disorder prediction 165 199 - -
Sto13g2177 223 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 156 IPR044799 GO:0003700
Sto13g2177 223 PANTHER NAC DOMAIN-CONTAINING PROTEIN 10 1 156 - -
Sto13g2177 223 MobiDBLite consensus disorder prediction 1 17 - -
Sto13g2177 223 MobiDBLite consensus disorder prediction 1 39 - -
Sto13g2177 223 MobiDBLite consensus disorder prediction 130 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2177 Sto-Chr13 28653667 28655588 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2177 1 154 NAC Transcription Factor Family AT4G28500 51.299 4.69e-45 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2177 - - dosa:Os01t0672100-02 213.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2177 13 28653667 28655588 Sto13g2177 13 28653667 28655588 ECH