Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2170 ATGGGTACCAATCAAGGGCAGGCAGAGTTGTTTCGGGCTCAGTCCCATTTGCACAAACATATATTGAATTACTTGAGCTCCATGTGTCTAAAGAGTGCACTGCAGCTGAACATACCAGACATAATCCACAGCCATGGCCAACCCATGACCCTCCCTGAGCTGCTCTTGGCTCTCCAGATTGATTCTGCAAAATCTGGCCATGTCTATAGGCTCATGCGCTTGTTGGTCCACTCTGGCATCTTTGCCACTACCAAGGTTCCTAAAggtgagaaggaagaagaagggtacGATCTCACACCATCCTCCAGGCTTCTCCTCAAACACAATGTCCCAACCTTGTCTCCGTTCGTTCAGGCAATGTTTTATACAACTTTGGTGCATACATCAGAGTTCTTGGGAGATTGGTTTCAAGGGAATGAGCTCACACCCTTTCACACTGCAAATGGGATAGGGTTTTGGGACTATCTAAGCCAAAACCAGGAATTCAACACACTCTTCAATGAAGCAATGATTAGCGATTCTAGTATGATTAACTTAGTTATCAAAGACTTCAAATCAGTTTTTGAGGGACACAATTTATTGGTTGATGTTGGGGGTGGTACAGGAGCTGTGGCTAGGATCATTTCTGAGTCATTGCCTAATCTGCAATGCACTGTACTAGAACTTCCGCATGTTGTTGAAAATCTGACAGACAGCAGTAATTTGAAATTTGTTGGAGGGGATATGTTTCAATTTATTCCTTCAGCAGATGCCATTCTTCTTAAGCTTGTTTTACATACTTATAGCGATGAAGACTGTGTGAGAGTACTGAAGAAGTGCAGGGAAGCAATTCCAAGCAAAGGCAAGGAAGGGAAAGTGATTATCATAGATATAGTGTTAAATGAGAAGAATGATGGGCACGAATCGAAAGAAGCAAAGCTCTTGTTCGATGTGTTGATGATGGTTTATTTcaatggaagagagagagaggaaaaagaATGGGAGAAACTCTTTTTGGAAGCTGGGTTCAGTCACTACAAGATAACACCCTTATTTGGTCCAAGGTCCCTCATTGAAGTTTATCCTTGA 1068 0.4054 MGTNQGQAELFRAQSHLHKHILNYLSSMCLKSALQLNIPDIIHSHGQPMTLPELLLALQIDSAKSGHVYRLMRLLVHSGIFATTKVPKGEKEEEGYDLTPSSRLLLKHNVPTLSPFVQAMFYTTLVHTSEFLGDWFQGNELTPFHTANGIGFWDYLSQNQEFNTLFNEAMISDSSMINLVIKDFKSVFEGHNLLVDVGGGTGAVARIISESLPNLQCTVLELPHVVENLTDSSNLKFVGGDMFQFIPSADAILLKLVLHTYSDEDCVRVLKKCREAIPSKGKEGKVIIIDIVLNEKNDGHESKEAKLLFDVLMMVYFNGREREEKEWEKLFLEAGFSHYKITPLFGPRSLIEVYP 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2170 355 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 354 IPR029063 -
Sto13g2170 355 PIRSF O-mtase 2 355 IPR016461 GO:0008168
Sto13g2170 355 PANTHER O-METHYLTRANSFERASE 5 355 IPR016461 GO:0008168
Sto13g2170 355 SUPERFAMILY "Winged helix" DNA-binding domain 7 108 IPR036390 -
Sto13g2170 355 Pfam O-methyltransferase domain 132 337 IPR001077 GO:0008171
Sto13g2170 355 Pfam Dimerisation domain 28 76 IPR012967 GO:0046983
Sto13g2170 355 PANTHER ASMT2 5 355 - -
Sto13g2170 355 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 18 355 IPR016461 GO:0008168
Sto13g2170 355 Gene3D Vaccinia Virus protein VP39 107 355 IPR029063 -
Sto13g2170 355 Gene3D - 2 105 IPR036388 -
Sto13g2170 355 CDD AdoMet_MTases 194 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2170 Sto-Chr13 28597119 28598565 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2170 28 341 Monolignol Biosynthesis Gene Families AT5G54160 31.988 1.13e-46 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2170 K22588 - qsu:112018723 480.33