Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2169 ATGGGTACCAATCAAGGGCAAGCAGAGGCAGAGTTGTTTCAGGCTCAGTACCATTTGTACAAACACACATACAATTTCATGAGCTCCATGTGTCTAAAAACTGCACTACAACTGAACATACCAGATAAAATCCACAGCCATGGCCGACCCATGACCCTCCCTGAGCTGCTCTTGGCTCTCCAGATTGATTCTGCAAAATCTGGCCATGTCTATAGGCTCATGCGCTTGTTGGTTCACTCTGGCTTCTTTGTCACTACCAAGGTAACTAATCCTCAAggtgagaaggaagaagaagaagggtatgATCTCACACCTTCCTCTAGGCTTCTTCTCAAACACAATGTCCCAACCTTGTCTCCATTCGTTCAGGCAATGTTTCATACAGCTTTGGTGCATACATCAGAGTTCTTGGGAGATTGGTTTCAAGGGAAGGAGCTCACACCCTTTCACACTGCAAATGGGATGGGATTTTGGGACTACCTGAGTCAGAACCAGGAGTTCAATACACTCTTCAATGAAGCAATGATTAGTGATTCTAGTATGATGAACTTGGTTATCAAAGactgtaaatcagtttttgagGGACTCAATTCATTGGTTGATGTTGGGGGTGGTAAAGGAGCTGCGTCTAGGATCATTTCTGAGTCATTGCCTAATATGCAATGCACTGTGCTAGATCTTCCACATGTTGTTGAAAATATGTCAGATAGCAGTAATTTGAAATTTGTTGGAGGTGATATGTTTCAGTCTATTCCTTCAGCAGATGCCATTCTTCTCAAGCTGGTTTTACATGCTTATAGTGACGAAGACTGTGTGAAGGTGCTGAAGAAGTGCAGGGAAGCAATTGCAGGCAAAGGCAAGGAAGGGAAAGTGATAATCATAGATATAGTGATAAATGAGAAGAATGATGGGCACGAATTGAAAGAAGCTAAGCTCTTATTCGATGTGGTGATGATGGTTTGTGTCActggaaaagagagagaggaaaaagaATGGGAGAAGCTATTCTTGCAAGCTGGGTTCAGTCACTACAAGATAACACCCATATTTGGTCTAAGGTCCCTTATTGAAGTTTATCCTTGA 1083 0.3989 MGTNQGQAEAELFQAQYHLYKHTYNFMSSMCLKTALQLNIPDKIHSHGRPMTLPELLLALQIDSAKSGHVYRLMRLLVHSGFFVTTKVTNPQGEKEEEEGYDLTPSSRLLLKHNVPTLSPFVQAMFHTALVHTSEFLGDWFQGKELTPFHTANGMGFWDYLSQNQEFNTLFNEAMISDSSMMNLVIKDCKSVFEGLNSLVDVGGGKGAASRIISESLPNMQCTVLDLPHVVENMSDSSNLKFVGGDMFQSIPSADAILLKLVLHAYSDEDCVKVLKKCREAIAGKGKEGKVIIIDIVINEKNDGHELKEAKLLFDVVMMVCVTGKEREEKEWEKLFLQAGFSHYKITPIFGLRSLIEVYP 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2169 360 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 360 IPR016461 GO:0008168
Sto13g2169 360 Gene3D Vaccinia Virus protein VP39 112 360 IPR029063 -
Sto13g2169 360 Gene3D - 2 110 IPR036388 -
Sto13g2169 360 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 117 359 IPR029063 -
Sto13g2169 360 PIRSF O-mtase 1 360 IPR016461 GO:0008168
Sto13g2169 360 PANTHER O-METHYLTRANSFERASE 7 360 IPR016461 GO:0008168
Sto13g2169 360 SUPERFAMILY "Winged helix" DNA-binding domain 9 113 IPR036390 -
Sto13g2169 360 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Sto13g2169 360 Pfam O-methyltransferase domain 137 342 IPR001077 GO:0008171
Sto13g2169 360 PANTHER ASMT2 7 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2169 Sto-Chr13 28594400 28596270 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2169 30 358 Monolignol Biosynthesis Gene Families AT5G54160 33.234 4.18e-45 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2169 K22588 - qsu:112018723 504.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2169 13 28594400 28596270 Sto13g2169 13 28594400 28596270 ECH