Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2168 ATGGATAGTAATAAAGCAAAAGATATGTTTGAAGGTCAAGCCCATTTGTATAGACTCATGTTTAACTTCATCACTTCTATGGGTCTCAAAGCTGCAATTGAGCTTGGCATAGCAGACGTAATTCATAATCATGGCCAACCCATTACTATATCTGAGCTAGTCTTAGCACTTCATATTAATCCTGCAAGAACTTCCTTTTTCTATAGGCTAATGCGCTTGTTGACTCATTCGGGCCTTTTTGTCAAAACCaaagtgaaggaagaagaagaagaagggtatgATCTCACACCTTGCTCTAAGCTTCTCCTCAAACACAATAATGTCCCAAACCTAAGTTCAATTGTTAAGGTAGCACTTGAGCCTCCTCTCTCCCAGCCATTTCAAGCGTTGGGAGAGTGGTTCCAAAGAGATGATGATGGAGTGAAAGTAGTGACTCCTTTTGAGGCTGTGTTTGGGAAGGGGTTCTGGCAGTATGGGAATGAGAATCCAGAGTTTGCTAACCTTTTCAATGAAGCAATGAGGAGTGATTCCGGGATGATGAACTTGGTGATTAAGGGTTGGAGAGATGTTTTTGAGGGTGTGAACTCATTGGTTGATGCTGGAGGTGGCGTGGGAGAAACTGCTAGAATCATTTCTGAGGAATTtccaaacatcaaatgcaccgTGCTTGATCTTCCTCACGTTGTTTCGGGTTTGGAAGATGGTgaaaatcttaaatttattgGAGGTGATATGCTTCAATCTATTCCTTCTGCCGATGCCATTCTTTTTAAGAATGTTTTAACCGGAAAAAGTGACGAAGACTGCGTGAAGGTGCTGAAGAAATGCAGAGAGGCGATTACAGAAAACGGCAAAAAAGGAAAAGTCATAATAATGGATATAGTGATAAATGAGAGGGACATGCATGACCTCACTCaaacaaaactctattttgactTATTGATGATGATCATAACGGccggaagagaaagagaagaaagggaaTGGGAGAAGCTTTTTATGGAAGCTGGATTCTCTCGTTACCACATCACACCCATTTTTGGTCTAAGGTCTCTAATTCAAGTTTAtccttga 1074 0.3678 MDSNKAKDMFEGQAHLYRLMFNFITSMGLKAAIELGIADVIHNHGQPITISELVLALHINPARTSFFYRLMRLLTHSGLFVKTKVKEEEEEGYDLTPCSKLLLKHNNVPNLSSIVKVALEPPLSQPFQALGEWFQRDDDGVKVVTPFEAVFGKGFWQYGNENPEFANLFNEAMRSDSGMMNLVIKGWRDVFEGVNSLVDAGGGVGETARIISEEFPNIKCTVLDLPHVVSGLEDGENLKFIGGDMLQSIPSADAILFKNVLTGKSDEDCVKVLKKCREAITENGKKGKVIIMDIVINERDMHDLTQTKLYFDLLMMIITAGREREEREWEKLFMEAGFSRYHITPIFGLRSLIQVYP 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2168 357 Gene3D Vaccinia Virus protein VP39 105 357 IPR029063 -
Sto13g2168 357 PANTHER ASMT2 5 357 - -
Sto13g2168 357 Gene3D - 1 102 IPR036388 -
Sto13g2168 357 Pfam O-methyltransferase domain 127 339 IPR001077 GO:0008171
Sto13g2168 357 PANTHER O-METHYLTRANSFERASE 5 357 IPR016461 GO:0008168
Sto13g2168 357 PIRSF O-mtase 1 357 IPR016461 GO:0008168
Sto13g2168 357 Pfam Dimerisation domain 27 75 IPR012967 GO:0046983
Sto13g2168 357 SUPERFAMILY "Winged helix" DNA-binding domain 8 106 IPR036390 -
Sto13g2168 357 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 355 IPR029063 -
Sto13g2168 357 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 17 357 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2168 Sto-Chr13 28590136 28592011 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2168 24 338 Monolignol Biosynthesis Gene Families AT5G54160 30.745 1.37e-45 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2168 K22588 - qsu:112018723 428.328