Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2167 ATGGATAGTGATAGAGTACAAGATATGTTTGAAGCTCAATCTCATTTGTATAGACTCATGTTTAACTTCATTACTTCCATGGCTTTAAAAGCTGCAATTGAGCTCGGCATAGCAGACGTAATTCATAGCCATGCCCATCCCATTACTATATCTGAGCTAGTCTTAGCACTTCATATTAACCCTGCAaaatcttcttttcttcataGGCTTCTCCTCAAACACAATGTCCCAAACCTAAGTTCAATTGTTAAGGTAGCACTTGAGCCTCCTCTCTCCCAGCCATTTCAAGCGTTGGGAGAGTGGTTCCAAAGAGATGATGAAGTGACGAAAGTGGCTCCTTTTGAGGTTGTGTTTGGGAAGGGGTTCTGGGAGTACGGGAGTGACAATCCTGAGTTTGCTAATCTTTTCAATGGGGCGATGAGGAGTGATTCCGGGATGATGAACTTGGTGATTAAGGATTGTACGGATGTGTTCGAGGGTGTGAATTCCTTGATTGATATCGGAGGTGGTGTGGGACAAACTGCCAGAATCATTTCTAAGgaatatccaaacataaaatgcACGGTGCTTGATCTTCCACATGTTGTCTCGGACTTGAAAGATAGTGAAAATCTCAAATTTGTTGGAGGTGATATGCTTCAATCTATTCCTTCTGCTGACGTCATGCTTTTTAAGAATGTTTTACATTGTTACGGTGATGAAGAGTGTGTGAAGGTACTGAAGAAATGCAAAGAGGCGATTTCATCAGGAAAAGGCAAAGAGAGAAAAGTGATCATTATAGATGTTGTTATAAATGAGAAGAAGGACATGCATGAGCTGACCCaaacaaaactctattttgattTATTGATGATGATTTTATCCAGCGGAAGAGATAGAGAAGAAAGAGAttgggagaagttatttttagaAGCTGGATTCTCTAGTTACCACATTACACCCATTTTTGGACTAAGGTCCATAATTCAAGTTTATCCTTGA 981 0.3782 MDSDRVQDMFEAQSHLYRLMFNFITSMALKAAIELGIADVIHSHAHPITISELVLALHINPAKSSFLHRLLLKHNVPNLSSIVKVALEPPLSQPFQALGEWFQRDDEVTKVAPFEVVFGKGFWEYGSDNPEFANLFNGAMRSDSGMMNLVIKDCTDVFEGVNSLIDIGGGVGQTARIISKEYPNIKCTVLDLPHVVSDLKDSENLKFVGGDMLQSIPSADVMLFKNVLHCYGDEECVKVLKKCKEAISSGKGKERKVIIIDVVINEKKDMHELTQTKLYFDLLMMILSSGRDREERDWEKLFLEAGFSSYHITPIFGLRSIIQVYP 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2167 326 PANTHER O-METHYLTRANSFERASE 69 326 IPR016461 GO:0008168
Sto13g2167 326 PANTHER O-METHYLTRANSFERASE 5 71 IPR016461 GO:0008168
Sto13g2167 326 Pfam Dimerisation domain 27 71 IPR012967 GO:0046983
Sto13g2167 326 PIRSF O-mtase 1 74 IPR016461 GO:0008168
Sto13g2167 326 PIRSF O-mtase 70 326 IPR016461 GO:0008168
Sto13g2167 326 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 326 IPR016461 GO:0008168
Sto13g2167 326 SUPERFAMILY "Winged helix" DNA-binding domain 7 71 IPR036390 -
Sto13g2167 326 PANTHER ASMT2 69 326 - -
Sto13g2167 326 PANTHER ASMT2 5 71 - -
Sto13g2167 326 Pfam O-methyltransferase domain 95 308 IPR001077 GO:0008171
Sto13g2167 326 Gene3D - 1 75 IPR036388 -
Sto13g2167 326 Gene3D Vaccinia Virus protein VP39 76 326 IPR029063 -
Sto13g2167 326 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 80 324 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2167 Sto-Chr13 28584626 28586104 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2167 11 312 Monolignol Biosynthesis Gene Families AT5G54160 28.144 6.00e-40 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2167 K22588 - qsu:112018723 384.8