Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2165 atggGTAGCGAGGGAGGAAACGATATGTTTGAAGGTCAAGCTCAATTGTACAGAGTCTTAATGAATTTCGTGAGTTCAATGGGTCTCAAAGCTGCAATTGAGCTTGGCATAGCAGACATAATTCAAAACCATGGCCAACCCATTACTTTGTCTGAGCTTGTTTCAGCACTTCAAATTGACCCCGTGAGATCTTCCTTTCTTTATAGGCTAATGCGCTTGTTGGCTCATGATGGCCTTTTCGAGAAAACCAAATTAAAAGGAGAAGAAGGGTATGGCCTCACACCTTGCTCTAGGCTTCTCCTGAAGAATCAAGTGCCGAGCCTGGTTTCATCTGTTCAGCTCATGTTCGATCCTGCCCTCACACAACCATATCAAGTGCTGGGAGAGTGGCTCCTCAGGAAAGATGACGTCAGGGTGACTCATTTCGAGGCCGTGTTTGGGAAGGGGTTCTGGGAGTATGGGAGTGAGAATCCCGAGTTTGCTAAACTTTTCAATGAATCCATGGGTAGTGATTCCGAGATGATGAACTTGGTGCTTAAGGATTGCAAGTATGTTTTTGAGGGTGTGAACTCGTTGGTTGATGGTGGAGGCGGTGTGGGCGAAACCGCTAGGATCATTTCCAACCAGTTtccaaacatcaaatgcacagTGGTTGATCTTCCACACGTTGTTTCGGGTTTGAAAGAAtctgaaaatgtcaaatttcttGGAGGTGATATGCGTCAACATATTCCTTCTGCAGACGTCGTTCTTTTTAAGAATGTTCTACACACTTTCAATGATGAAGACTGCGTGGAGATACTAAAAAAAGCTAGGAAGGCGATTTCTGGGAAAGGCAAAAACGGAAAAGTTATACTAATTGATGTTGTGATAAATGAGAAGAAGGACACCTATGAACTCACTGAAACGAAAATCTATTTTGATCTATTGATGATGGTTTCAACACACGGAAGAgacagagaagaaaaagaatgggACAAGATCTTTAAAGAAGCTGGATTCTCTCGTTACGATATTGCACATTTTGGTGTAAGGTCCCTACTTCAAGTTTATCCTTAA 1059 0.4042 MGSEGGNDMFEGQAQLYRVLMNFVSSMGLKAAIELGIADIIQNHGQPITLSELVSALQIDPVRSSFLYRLMRLLAHDGLFEKTKLKGEEGYGLTPCSRLLLKNQVPSLVSSVQLMFDPALTQPYQVLGEWLLRKDDVRVTHFEAVFGKGFWEYGSENPEFAKLFNESMGSDSEMMNLVLKDCKYVFEGVNSLVDGGGGVGETARIISNQFPNIKCTVVDLPHVVSGLKESENVKFLGGDMRQHIPSADVVLFKNVLHTFNDEDCVEILKKARKAISGKGKNGKVILIDVVINEKKDTYELTETKIYFDLLMMVSTHGRDREEKEWDKIFKEAGFSRYDIAHFGVRSLLQVYP 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2165 352 Gene3D - 2 100 IPR036388 -
Sto13g2165 352 PANTHER ASMT2 5 352 - -
Sto13g2165 352 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 108 341 IPR029063 -
Sto13g2165 352 PANTHER O-METHYLTRANSFERASE 5 352 IPR016461 GO:0008168
Sto13g2165 352 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 17 352 IPR016461 GO:0008168
Sto13g2165 352 SUPERFAMILY "Winged helix" DNA-binding domain 7 103 IPR036390 -
Sto13g2165 352 Pfam Dimerisation domain 27 75 IPR012967 GO:0046983
Sto13g2165 352 Gene3D Vaccinia Virus protein VP39 102 352 IPR029063 -
Sto13g2165 352 PIRSF O-mtase 2 352 IPR016461 GO:0008168
Sto13g2165 352 Pfam O-methyltransferase domain 126 335 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2165 Sto-Chr13 28565457 28567066 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2165 24 345 Monolignol Biosynthesis Gene Families AT5G54160 30.931 1.70e-46 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2165 K22588 - mnt:21398156 390.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2165 13 28565457 28567066 Sto13g2165 13 28565457 28567066 ECH