Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2162 atGGCTTTTGGtggtgataataataataatcatcacAAAGAAGATGATTCTTCTTTCACTTCAGCCTTGACTCTGTGCTTTTCCCAGATTCAATCTGCTGCTCTAAATACTGCCATTGAGCTGAACCTATTTAACATCATAGCTAGGGCTAATGGGAGACACGTGTCGGTCACTGAAATTGTTTCCGAGCTTCCGACTTCGGCTCAACACCAAGACTTGGCTTTTAGGCTGAGTCGTCTCTTGAGGCTTCTGGCTTTTCACTCTCTTCTTACTTGTTCATGTGACGACACCACTAGGGAACCACTCTATGGGATTTCTCCCATTGGGAAATTCTTTGTGAGTGATCACTACAACACTAGTGGATCCGTGGCTTTGATGCCGTTATTTTTGACTCACCGGGCACTTCTTGATACTTGGCTGAACTTTAAGAATGCAATAATAGAAGAAGACGCTGACGCCTTCAAGAAAGTTCATGGAATACCGTTGTACAAATACTCACAAACAGACCCAAAATTGAATACCTTGTTCAACCAATCAATGGAAGACCTTAGCTTTATATTGCTGAATAGGGTACTTGAATTATACAAAGGATTTGAGGGAATATCTACACTGGTTGATGTGGGTGGTGGGATTGAACAtattggaggagatatgttCGCAGGAGTTCCCAAAGGTGGTGATGCCATATTATTGAAGaaTGTATTGCACAATTGGTCGGATGAAAATAGCATAAAAATTCTGAAGAAATGCCATGAAGCATTGGGAGAGAATGGGAAGGTGATAGTGTTGGAATTGATAATGCCTGAAGTAATGGAGGAATTAGAAGATGGGAAGTTTGTTTCAGGGCTTGACAACTTAATGTTTATTATTGATGGAAGAGAAAGAACTGagaaagagtttgagtcttTGTGCAAACGCTCTGGATTTTCTGCCTTCAAAGTTGCTTCTCGTGCCTACTCTGTTCAAGGAGTCATGGaattttacaaataa 990 0.3859 MAFGGDNNNNHHKEDDSSFTSALTLCFSQIQSAALNTAIELNLFNIIARANGRHVSVTEIVSELPTSAQHQDLAFRLSRLLRLLAFHSLLTCSCDDTTREPLYGISPIGKFFVSDHYNTSGSVALMPLFLTHRALLDTWLNFKNAIIEEDADAFKKVHGIPLYKYSQTDPKLNTLFNQSMEDLSFILLNRVLELYKGFEGISTLVDVGGGIEHIGGDMFAGVPKGGDAILLKNVLHNWSDENSIKILKKCHEALGENGKVIVLELIMPEVMEELEDGKFVSGLDNLMFIIDGRERTEKEFESLCKRSGFSAFKVASRAYSVQGVMEFYK 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2162 329 CDD AdoMet_MTases 208 262 - -
Sto13g2162 329 SUPERFAMILY "Winged helix" DNA-binding domain 14 116 IPR036390 -
Sto13g2162 329 PANTHER O-METHYLTRANSFERASE 18 211 IPR016461 GO:0008168
Sto13g2162 329 PANTHER O-METHYLTRANSFERASE 210 329 IPR016461 GO:0008168
Sto13g2162 329 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 18 211 - -
Sto13g2162 329 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 210 329 - -
Sto13g2162 329 Gene3D Vaccinia Virus protein VP39 117 211 IPR029063 -
Sto13g2162 329 PIRSF O-mtase 1 212 IPR016461 GO:0008168
Sto13g2162 329 PIRSF O-mtase 209 329 IPR016461 GO:0008168
Sto13g2162 329 Gene3D Vaccinia Virus protein VP39 212 329 IPR029063 -
Sto13g2162 329 Pfam O-methyltransferase domain 211 310 IPR001077 GO:0008171
Sto13g2162 329 Gene3D - 2 112 IPR036388 -
Sto13g2162 329 Pfam Dimerisation domain 34 85 IPR012967 GO:0046983
Sto13g2162 329 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 23 329 IPR016461 GO:0008168
Sto13g2162 329 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 122 327 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2162 Sto-Chr13 28536225 28538035 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2162 15 321 Monolignol Biosynthesis Gene Families AT5G54160 38.150 1.89e-71 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2162 K13066 - gmx:100784030 296.589