Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2161 ATGGGTAGCGAGGGAGGAAACGATATGTTTAAAGGTCAAGCTGAATTGTATAGAGTCTTGATGAATTTTGTGAGTTCAATGGGTCTGAAAGCTTCAATTGAGCTTGGCATAGCAGACATAATTGAAAATCATGGCCAACCTATTACTTTGTCTGAGTTGGTTTCAGCACTTCAAATTGATCATGAAAGGTCTTCTTTTCTTTATAGGCTAATGCGCTTGTTGGCTCATGATGGCATTTTTGAGAAAACCAAAGTAAAGGAAGAAGAAGCCTATGGTCTCACACCTTGTTCTAGGCTTCTCTTAAAAGATCACGTGCCAAGCCTGGTTTCATCAATTAAGTTCATGTTTGATCCTGCTCTCACGCAGCCATATCACGTGCTGGGAGAGTGGCTCCTCAGGAAAGATGACGTCAAGGTGACTCATTTCGAGGCTGTGTTTGGGAAGGGGTTTTGGGAGTATGGGAGTGAGAATCCCGAGTTTGCTAAGCTTTTCAATGAATCCATGGGTAGTGATTCTGAGATGATGAACTTGGTGCTTAAGGATtgcaaacatgtttttgagggtGTGAACTTgttggttgatggtggtggcggtGTGGGCAAAACTGCTAGGATCATTTCTAACCAGTTTCCGAACATTAAATGCACAGTGGTTGATCTTCCACATGTTGTTTCGGGTTTGCAAGATtctgaaaatgtcaaatttcttGGAGGTGATATGCGTCAGCATATTCCTTCCGCTGACGTCATTCTTTTTAAGAATGTTCTACATACTTTCAGTGACGAAGACTGCGTGGAGATACTTAAGAAAGCTAGAAAGGCGATTTCGGGAGAAGGCAAAGAGGGAAAAGTTATACTAATAGATGTTGTGATTAATGAGAAGAAGGACACCTATGAACTCACTAAAACAAAAATCTATTTTGATTTATTGATGATGGTTTTAACACCTGGAAGAGACAGGGAAGAAAAAGAATGGGACAAGATCTTTAAAGAAGCTGGATTCTCTCGTTACGACATTGCACATTTTGGTGTAAGGTCTCTACTTCAAGTTTATCCTTAG 1059 0.3824 MGSEGGNDMFKGQAELYRVLMNFVSSMGLKASIELGIADIIENHGQPITLSELVSALQIDHERSSFLYRLMRLLAHDGIFEKTKVKEEEAYGLTPCSRLLLKDHVPSLVSSIKFMFDPALTQPYHVLGEWLLRKDDVKVTHFEAVFGKGFWEYGSENPEFAKLFNESMGSDSEMMNLVLKDCKHVFEGVNLLVDGGGGVGKTARIISNQFPNIKCTVVDLPHVVSGLQDSENVKFLGGDMRQHIPSADVILFKNVLHTFSDEDCVEILKKARKAISGEGKEGKVILIDVVINEKKDTYELTKTKIYFDLLMMVLTPGRDREEKEWDKIFKEAGFSRYDIAHFGVRSLLQVYP 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2161 352 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 108 341 IPR029063 -
Sto13g2161 352 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 17 352 IPR016461 GO:0008168
Sto13g2161 352 Pfam O-methyltransferase domain 125 335 IPR001077 GO:0008171
Sto13g2161 352 Gene3D - 2 100 IPR036388 -
Sto13g2161 352 PIRSF O-mtase 2 352 IPR016461 GO:0008168
Sto13g2161 352 SUPERFAMILY "Winged helix" DNA-binding domain 7 104 IPR036390 -
Sto13g2161 352 Gene3D Vaccinia Virus protein VP39 101 352 IPR029063 -
Sto13g2161 352 Pfam Dimerisation domain 27 75 IPR012967 GO:0046983
Sto13g2161 352 PANTHER ASMT2 5 352 - -
Sto13g2161 352 PANTHER O-METHYLTRANSFERASE 5 352 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2161 Sto-Chr13 28521348 28523171 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2161 24 345 Monolignol Biosynthesis Gene Families AT5G54160 30.330 1.03e-45 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2161 K22588 - qsu:112018723 391.349