Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2154 ATGAAGAAGATTTCTAAGACCAGCTGCAAGTCTGCATCGCACAAGCTCTTTAAGGACAAGGCAAAGAACCGAGTTGATGATTTGCAGCTTATGTTCATGGATCTGCAGTTTGCCAGGAAGGAGAGCCGTACAGTTGATGCTGCAGTTCTGGAGGAGCAAGTCCATCAGATGCTTCGTGAGTGGAAGGCTGAGCTCAATGAGCCTTCTCCTGCTTCTTCTTTGCAGCAGGGTGGCAGTCTTGGGTCATTCTCGACCGATATCTGCCGGCTATTGCAGCTATgtgaagaggaagatgatgctACTAGTCCGTTAGCAGCACCTAAGCCTGAACCTAATGACCAGAGCCTGCAAACTGGGTGTAATGTGATATTCCATGAGCAGGGCCAACAGCAACATGCGTTCCCGTTGGTTGATGAGTGCAAACACTCCACCTCAGGTGTTCGCAATGTGGCAAATAACAACTTTGAAGGGGCAACTCTAGAATACCAATTTGATATGCATCAGGATTTTGATCATAGCTTTTATGCTGGTTTTAATAATCCAGCTTTTTGTGAGGAGGATACCATTTCTCATTTGTCTAGCTATGTACCAAGTATCTGCCCTCCTCCTTCTGCTTTCTTAGGCCCAAAATGTGCACTTTGGGATTGTCCAAGGCCTGCTCAAGGATTGGACTGGTGTCAAGATTACTGCAGTAGCTTTCATGCTGCTCTAGCATTGAATGAAGGGCCACCAGGCATGGCCCCAGTTCTTCGACCTGGAGGCATTGGTTTGAAGGATAATTTACTTTTTGCTGCTCTAAGTTCAAAGGCACAAGGAAAAGATGTTGGCATCCCAGAATGTGAGGGAGCAGCAACTGCAAAGTCTCCATGGAATGCACCTGAGCTTTTTGATCTGTCTGTTCTTGAGGGTGAAACTATTAGGGAGTGGCTCTTCTTTGATAAGCCTCGAAGAGCATTTGAGAGTGGAAACAGAAAGCAGAGATCGTTGCCAGATTATAGTGGACGTGGTTGGCATGAATCTAGGAAGCAAGTGATGAATGAGTTTGGAGGGCTGAAGAGATCCTATTATATGGACCCACAACCACTGAACCATTTTGAGTGGCACCTTTATGAATATGAGATTAACAAGTGTGATGCATGTGCCTTGTATCGGTTGGAACTAAAGCTCGTAGATGGGAAGAAGAATTCCAAAATAAAAGTAACAAATGATTCAGTGGCTGATCTGCAGAAGCAGATGGGAAGGTTATCTGCTGAGTTTCCACCTGATAACAGACGGCCAGCTAAAGGCAGAGCCAAAATTAATGCCAAGGTTGGCATAGGTGGTGTCTATTCAGCTTCAAACAGAGTTGCTCCACTTAATGGGACATATGAGTATGGGTTAGCTGCACCATATGACTATCTTGTCGAGAACATAAGCGACTATTATGTGACGTGA 1434 0.447 MKKISKTSCKSASHKLFKDKAKNRVDDLQLMFMDLQFARKESRTVDAAVLEEQVHQMLREWKAELNEPSPASSLQQGGSLGSFSTDICRLLQLCEEEDDATSPLAAPKPEPNDQSLQTGCNVIFHEQGQQQHAFPLVDECKHSTSGVRNVANNNFEGATLEYQFDMHQDFDHSFYAGFNNPAFCEEDTISHLSSYVPSICPPPSAFLGPKCALWDCPRPAQGLDWCQDYCSSFHAALALNEGPPGMAPVLRPGGIGLKDNLLFAALSSKAQGKDVGIPECEGAATAKSPWNAPELFDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNHFEWHLYEYEINKCDACALYRLELKLVDGKKNSKIKVTNDSVADLQKQMGRLSAEFPPDNRRPAKGRAKINAKVGIGGVYSASNRVAPLNGTYEYGLAAPYDYLVENISDYYVT 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2154 477 PANTHER TRANSCRIPTION FACTOR VOZ1 1 477 IPR039277 GO:0006355|GO:0048578
Sto13g2154 477 PANTHER TRANSCRIPTION FACTOR VOZ1 1 477 - -
Sto13g2154 477 Coils Coil 398 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2154 Sto-Chr13 28475676 28478859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2154 3 476 VOZ-9 Transcription Factor Family AT1G28520 72.154 0.0 712
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Sto13g2154 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2154 - - gmx:100798565 876.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2154 13 28475676 28478859 Sto13g2154 13 28475676 28478859 ECH