Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2146 ATGAAAGTGACTCGGCTTTTGGCAATATGCTCAGCTGATTCGATTATTTTAATCGCTTGGGACGGCAAAACGAGAGAGTCGAAATTCTTCATATTCCCATATCCTGGCCCACAATCATTGAAACGTATTGGAGTTAGTAAATGCCATGCAAGAGCTGTTGACTTGCTTTCTGATCCAACATTGGAAGATCTTTCAGAAATGGAACAAGAAATTAAAGTGTTTCTATTGCTTCTTCTATTCCAAACTCTGCTTGTAGCAGCACAGACCTCCTATCAGGATTTTATTTCCCTACAATCTCTCACAGAATCCTGGGAGAACAAACCACCAAACTGGGTGGGTTCGGATCCTTGTGGCAGTGATTGGGAAGGAATTCAGTGCACTAATTCAAGAGTGACCTCAATAATATTAGCAGGCATGAATTTGGTGGGCAAACTGTCTTCAGAAATCCAGTTAATATCTGAATTAGAGACTCTGGATCTCTCTTTCAACAAGGGCCTGACAGGAACAATTCCAGAAGAAATTGGGAATCTGAGAAATTTACAAACCCTTATATTGGTTGGTTGTGATTTCTTTGGTCCTATTCCAGAATCAATAGGATCTCTACAGCAGCTGACCTTTCTAGCTCTGAATTCTAATCGGTTCAGTGGAAATATTCCTCCTACCATTGGAAATCTATCCAATATAAATTGGCTAGATCTTTCTGATAATCAGCTTGAGGGGCCTATCCCTGTCTCTGATGAAGAAGGACTTGGTCTTAACAAGCTGCTTAAGGCAAAACACTTTCACATGGGAAACAATAGGCTCTCGGGTAGGATTCCAGCTGTTCTTTTTAGCCCAAATATGAGTCTGGTCCACGTGCTTTTTGACAGCAATCAATTAAATGGCAGCATTCCAAGGACAATTGGACTTGTGAATTCATTGGAGGTGATACGTTTTGATAGGAATCAATTAGTTGGGGGAGTACCTTCAAACATCAGCAATCTCAGAAATCTCAGTGAGCTGGATCTAAGCAACAATTCTTTCGATCCTTCTGGCATTCCTTCATGGGCTTCAAGTTTGCAGTCTTTGAAAACATTGAAGTTGGCAAACACTACACTTCAAGGGCAGATACCAGTTTCCTTATTTAACCAACCCAATTTAGAGTCTGTGGTATTGAGGGCAAACAAGCTCAACGGAACCTTAGATATTGGCAATGCCTACAGCAGCCAGCTGCAACTTATTGATTTGGAGGATAATTCAATCACTGACTTTGATCAGAAAGACATAAGAATTAATGTTGCAGTAGTACTAGCTGGCAACATTATTTGTACTGAAACAGGAGCTTCTAAACAAAGTTACTGCCAAGAACCTGAATCCAATTCCTTATATTCAACACCTCCAAATAATTGTGCACCTCCTTCTTGCAGTTCTGACCAGATTTCCAGTCCTAACTGTAAATGTGCATATCCCTACACTGGAAATCTATATGCCAGAGCGCTTAGTTTCTCAAACCTTGATAACGGAAGTTATTATAAGGATCTTGAGCAGTCTCTGATGACTGCTTTTCAATCACAAAAACTTCCAGTGGATTCTGTTTCTCTTAGCAATCCCTTCAGGAATTCATCTACTGATTATTTTGAATTGTCCCTGAAAGTATTCCCATCTTCAAGTGATCGTTTCAATAGAACTGGAGTTTCAAGGATTGCTTTTGTTCTTAGCAACCAGATTGTTAAGCCCCCAAAATTTTTCCTTCCTTATTTCTTCATTGGTGATGATTACGGATACTACTCAGGAGAAAAATCAAAGAAGTCAACACATGTAGGGGTTATAGTTGGTGCAGTGGCGGCTGTTGTGGTCTTTCTGGTACTAGCATTCCTTGTCGGGATATATGCCATCCGCCAAAAGAAAAGAGCAAAAAGAGCTACTGACCTGAACCCTTTTGCAAACTGGGAACTGAACAAGAATAGTGGCAAAGCTCCTCAGTTAAAAGGAGCACGATTGTTTTCGATAGAAGAGCTAAAGAAATGCACGAACAACTTCTCAGAAGCCAACACTATTGGATCTGGGGGCTATGGAAAGGTtggagtatttatttatttatttttacgtGGTTTGGTCAATACAGGAAAGTCTGGGATCAGAATGGATTGGATGAGGAGGCTTAAAGTAGCCCTGGGAGCAGCCAGAGGTCTGACCTATCTTCATGAACTTGCCAACCCTCCAATCATACACAGGGACATAAAATCAAGCAATATCCTACTTGATGAGCACCTGAATGCAAAAGTCGCAGATTTTGGACTCTCCAAACTTCTTCTTGACAGTGAAAGAGGCCATGTCACTACTCAAGTCAAAGGGACAATGGAGGTCTTAGGTTCAAATCTCATTGCAGCAGGAGGTTACCTGGATCCTGAGTATTACATGACCCAACAGTTGACAGAGAAGAGCGACGTATATAGCTTTGGAGTGCTGATGCTGGAACTGGTAACAGCAAGAAGGCCAATAGAGAAAGGGAAGTATATTGTTAGAGAGGTTCAAAGGGTAATGGATACATCAAAAGAACTATCCAACCTTCATTCCATCATAGACCCATTCATCAACAAAATAACTCCACAAGGTGTTGATAAGTTTGTGGACTTGGCGATGAGGTGCGTCAAGGAATATGCAGCTGAGAGGCCAACAATGGCTGAGGTGGTGAAAGAGATTGAGAATATAATGGAGCTTTCTGGATTGAACCCCACTGCAGAATCAGGTACAACAACAGATGAAAGTAATGTGGAAGTAAGTGGCGGTATTGTACACCTTCCTCATGGCAGTGAAGGTTTCAGCTACAGTGGAATTTTTCCTTCAACTAGGATAGAACCTCAAGCAGCATCCAGGCTGCTTCACAGCCGAGACATCGTCGCGCGAGCTGACGTTGATGGTCTGCCCTTTGGGCAACGCCGAGGGATCGTCGCCGATGTCGAGCGCCTTCTTGCTGACGACCCGGTAGATCTGGGAGAGCACTTCGGTGAAGGCGTTCTCCACATTCATGGACTCGAGGGCAGAGGTTTCCATGAAGAACGTGTTCTCTCGCTCGGCGAATGCGGTGGCGTCTTCCTCGGAGACGGCTCGCAGGTGGCGGAGGTCGGCCTTGTTGCCGACGAGCATGACGACAATGTTGGCATCGGTGTGACCCCTCAGCTCCTTCAGCCATCTCTCTACGTTCTCAAATATCTGAGCCTTGACGACCTTATCGTCGACGCGAATGCTGCGGGTGGCGAACTCGACGCCGATGGTGGACTTGGACTCGCGGCTGAACTCATTCTTGGTGAATCGGGAGAGAAGATTGGATTTGCCGACGCCGGAGTCGCCGATGAGCACAACCTTGAACAGTGGGTCAAAAAAGATGAAACCATAAAGTGCAATTCCTTTTCTTGGGTGGTTTCTTCTTTGGCTTTAATGGCCTCAATGCCACCTTAA 3438 0.436 MKVTRLLAICSADSIILIAWDGKTRESKFFIFPYPGPQSLKRIGVSKCHARAVDLLSDPTLEDLSEMEQEIKVFLLLLLFQTLLVAAQTSYQDFISLQSLTESWENKPPNWVGSDPCGSDWEGIQCTNSRVTSIILAGMNLVGKLSSEIQLISELETLDLSFNKGLTGTIPEEIGNLRNLQTLILVGCDFFGPIPESIGSLQQLTFLALNSNRFSGNIPPTIGNLSNINWLDLSDNQLEGPIPVSDEEGLGLNKLLKAKHFHMGNNRLSGRIPAVLFSPNMSLVHVLFDSNQLNGSIPRTIGLVNSLEVIRFDRNQLVGGVPSNISNLRNLSELDLSNNSFDPSGIPSWASSLQSLKTLKLANTTLQGQIPVSLFNQPNLESVVLRANKLNGTLDIGNAYSSQLQLIDLEDNSITDFDQKDIRINVAVVLAGNIICTETGASKQSYCQEPESNSLYSTPPNNCAPPSCSSDQISSPNCKCAYPYTGNLYARALSFSNLDNGSYYKDLEQSLMTAFQSQKLPVDSVSLSNPFRNSSTDYFELSLKVFPSSSDRFNRTGVSRIAFVLSNQIVKPPKFFLPYFFIGDDYGYYSGEKSKKSTHVGVIVGAVAAVVVFLVLAFLVGIYAIRQKKRAKRATDLNPFANWELNKNSGKAPQLKGARLFSIEELKKCTNNFSEANTIGSGGYGKVGVFIYLFLRGLVNTGKSGIRMDWMRRLKVALGAARGLTYLHELANPPIIHRDIKSSNILLDEHLNAKVADFGLSKLLLDSERGHVTTQVKGTMEVLGSNLIAAGGYLDPEYYMTQQLTEKSDVYSFGVLMLELVTARRPIEKGKYIVREVQRVMDTSKELSNLHSIIDPFINKITPQGVDKFVDLAMRCVKEYAAERPTMAEVVKEIENIMELSGLNPTAESGTTTDESNVEVSGGIVHLPHGSEGFSYSGIFPSTRIEPQAASRLLHSRDIVARADVDGLPFGQRRGIVADVERLLADDPVDLGEHFGEGVLHIHGLEGRGFHEERVLSLGECGGVFLGDGSQVAEVGLVADEHDDNVGIGVTPQLLQPSLYVLKYLSLDDLIVDANAAGGELDADGGLGLAAELILGESGEKIGFADAGVADEHNLEQWVKKDETIKCNSFSWVVSSLALMASMPP 1145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2146 1145 Gene3D Phosphorylase Kinase; domain 1 643 691 - -
Sto13g2146 1145 Gene3D Ribonuclease Inhibitor 82 250 IPR032675 -
Sto13g2146 1145 SUPERFAMILY L domain-like 100 419 - -
Sto13g2146 1145 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 701 917 - -
Sto13g2146 1145 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 74 687 - -
Sto13g2146 1145 SMART serkin_6 598 898 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2146 1145 SUPERFAMILY Protein kinase-like (PK-like) 659 901 IPR011009 -
Sto13g2146 1145 ProSiteProfiles Protein kinase domain profile. 598 898 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2146 1145 Pfam Protein kinase domain 715 892 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2146 1145 ProSitePatterns Serine/Threonine protein kinases active-site signature. 735 747 IPR008271 GO:0004672|GO:0006468
Sto13g2146 1145 PANTHER - 701 917 - -
Sto13g2146 1145 PANTHER - 74 687 - -
Sto13g2146 1145 Gene3D Transferase(Phosphotransferase) domain 1 695 912 - -
Sto13g2146 1145 Gene3D Ribonuclease Inhibitor 251 426 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2146 Sto-Chr13 28417396 28427867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2146 701 948 Receptor kinase-like Gene Family AT5G49760 60.714 6.96e-89 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Sto13g2146 Pkinase 2.6e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2146 - - pvy:116142618 963.37