Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2141 ATGGCAGTAGTATCATCATTGTTAGTGAAGGCAATGCTGGGTTTGAGTTTGAGTGTGATGATGCTGCTGCCATGGTTTTCACTTGCCATTGACATTCACTATGTAAGGGAAATGGCAGCTCAGAATAATGTGAGTTGCATTCTAGTGTTTGGAGATTCTAGTGTTGATCCTGGAAACAACAATGTTCTTCCCACCACCATGAAAAGCAACTTCCCTCCCTATGGGAAAGACTTCTTCAATGGCCTCCCTACAGGAAGGTTCAGCAATGGCAGACTTGCTTCAGATTTCATtgCTGAAGCAGTGGGGTACAGAAACATAGTTCCAGCATTTCTAGACCCAAAGCTGAAGCTGGAAGATCTTCCCCATGGTGTTAGTTTCGCCTCAGCAGCAACAGGATATGACGATTTTACTGCCAATATTTCGAATGTTCTTCCAGTTTCGAGACAAATAGAGTATTTTGAGCATTACAAGATCCACATGAGAAAACTGATGGGAGAAGAGAGAGCAGAATTCGTGATAAGAAATGCGTTGTATATAATAAGTATGGGCACAAATGACTTCTTGCAAAACTACTACTTGGATTCCACTCGCCCCAAGCAATTCACTGTCCAACAGTACCAGAATTTCTTGCTCTCCCGCATGACACGTGACATTCAGGTGATCCATAGATTAGGAGGGCGTAGAATAGTGGTGGTAGGGGTCCCACCGCTAGGGTGCATGCCCCTAGTGAAGACGTTGTATAGCCAAGCAAATTGTGTCGCAAGCTTGAACAGGGTATCCTTCTCATTCAATGCTAAGTTATTGCACCAACTCAACACCTTGAAGACAAACTTGCACTTGAAAACTGCCTTTGTTGATGCTTATGGCTCCATCCTTAGGGCTGTCATCCACCCCGCCAAATACGGGTTTGAGGAAGGGAGAAAGGGATGCTGTGGAACAGGGGCAGTGGAATATGGGGATTCATGCAGAGGAATGGAAACTTGTAAGGATTCAAGCAAATACGTATTCTGGGATGCAGTTCATCCCTCAGAGAAGATGTACAAGATCATAGCCGATGCAGCATTAGACTCTGTCACAAAAGAACTCACtgcataa 1095 0.442 MAVVSSLLVKAMLGLSLSVMMLLPWFSLAIDIHYVREMAAQNNVSCILVFGDSSVDPGNNNVLPTTMKSNFPPYGKDFFNGLPTGRFSNGRLASDFIAEAVGYRNIVPAFLDPKLKLEDLPHGVSFASAATGYDDFTANISNVLPVSRQIEYFEHYKIHMRKLMGEERAEFVIRNALYIISMGTNDFLQNYYLDSTRPKQFTVQQYQNFLLSRMTRDIQVIHRLGGRRIVVVGVPPLGCMPLVKTLYSQANCVASLNRVSFSFNAKLLHQLNTLKTNLHLKTAFVDAYGSILRAVIHPAKYGFEEGRKGCCGTGAVEYGDSCRGMETCKDSSKYVFWDAVHPSEKMYKIIADAALDSVTKELTA 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2141 364 PANTHER GDSL ESTERASE/LIPASE EXL3 27 362 - -
Sto13g2141 364 Gene3D SGNH hydrolase 31 363 IPR036514 -
Sto13g2141 364 PANTHER GDSL ESTERASE/LIPASE 27 362 - -
Sto13g2141 364 Pfam GDSL-like Lipase/Acylhydrolase 47 353 IPR001087 GO:0016788
Sto13g2141 364 CDD SGNH_plant_lipase_like 46 356 IPR035669 -
Sto13g2141 364 SUPERFAMILY SGNH hydrolase 176 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2141 Sto-Chr13 28367161 28370714 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2141 26 362 Pollen Coat Proteome AT1G75930 33.046 3.99e-56 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2141 - - gmx:100819691 489.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2141 13 28367161 28370714 Sto13g2141 13 28367161 28370714 ECH