Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2128 ATGCACAAGGTAAACGTCTCAGAAACCACTCTCATCCTCCCTTCTCACCCTCCTTTCCTCCACGACCACGGCCTCTCTCTCTCCCACCTCGACACCGACCGCAATCTCCACCTCACCTTCCGCTACCTTCGCGCTTACGCCAACACCCACACCGTCTCCCGCGACCCATTCCCCATCATCTCTTCCGCCTTCTCCGAAGCACTCGTTCACTTCTACCCACTTGCCGGCGCACTCCGTCGCCGTCCGGAAAAAGACCAGCGCCTCGAGATCTGGTGCGCCGCCGGCCAAGGCGTCCCTCTGATTCGGGCTGATGTAGATTTCACGCTTGACTCGGTGAATTACCTCGACGACCCCGAGTCTCCTTTCGTCGAACAGTTGGTGCCCGACCCGGACTCGGACGAGGCAATGATCCACCCGTGTGTGCTCCAAATCACGTCGTTCAAGTGCGGCGGGTTCGCGCTTGGGGCCGCGATACACCACTCGTTGTGTGACGGGCTTGGGGCCACTCTGTTTTTCGGCGCGGCGGCTGAGCTGGCTCGCGGGGCAACCCGGGTAACGGTGAAGCCTGTTTGGGAGCGCGCGGAGTTGTTGGGTCCCAGAGACCCGACCCGGATAGAATCGCCGGGGATCCGGGAGTTTCTGCAATTAGATAAGGGTTTTTCGCCGTACAAGCAAGAGATTGGTGTGGTTGTGAGAGGTTGCTTCCATGTGAGAGACGAGTGCTTGGAGAGGTTCAAGAGATCGCTGTTTGAGCAATCTGGGTTGAACTTCACCACATTTGAGGCTTTGGGTGCGTACATTTGGAGGTCCAAGGTTAAGGCCTCAGGGATTGGAGCCGacgagaatatcaagtttgcatACTCAGTTAACATCCGCAAAGTAACGAACCCGTCTCTTCCATCTGGCTACTGGGGCAATGGTTGCGTTCCAATGTACGTACAACTGAGGGCAAAAGACGTAATAGAGAACCCCATTTGGGAAACAGCAGAGGAAATCAAGAAGAGCAAGAGCAATGTGAGCGACGAGTACGTCCGATCCTTCGTTGATTATCAAGAGATGCATTATGGGGATGGGATCACAGCAGGGAAAGGGGTGAGTGGGTTCACCGATTGGAGACACTTGGGCCATTCGACGCTGGATTTTGGGTGGGGTGGTCCAGTCACTGTCATGCCTCTTGCCAGGAACCTCCTTGGAAGTGTTGAGCCTTGCTTCTTCTTGCCTTATTCCACGGCTAGCGCTGGCCGGAAGGATGGCTTCAAGGTTTTGGTGACTCTGCAAGAGCCTGCTTTGCCTGCTTTTAGACAAGACATGAAGGTGTTTTCTAGTGGCCAACATCCTGGGCAATCTTAA 1350 0.5474 MHKVNVSETTLILPSHPPFLHDHGLSLSHLDTDRNLHLTFRYLRAYANTHTVSRDPFPIISSAFSEALVHFYPLAGALRRRPEKDQRLEIWCAAGQGVPLIRADVDFTLDSVNYLDDPESPFVEQLVPDPDSDEAMIHPCVLQITSFKCGGFALGAAIHHSLCDGLGATLFFGAAAELARGATRVTVKPVWERAELLGPRDPTRIESPGIREFLQLDKGFSPYKQEIGVVVRGCFHVRDECLERFKRSLFEQSGLNFTTFEALGAYIWRSKVKASGIGADENIKFAYSVNIRKVTNPSLPSGYWGNGCVPMYVQLRAKDVIENPIWETAEEIKKSKSNVSDEYVRSFVDYQEMHYGDGITAGKGVSGFTDWRHLGHSTLDFGWGGPVTVMPLARNLLGSVEPCFFLPYSTASAGRKDGFKVLVTLQEPALPAFRQDMKVFSSGQHPGQS 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2128 449 Gene3D - 1 212 IPR023213 -
Sto13g2128 449 Gene3D - 224 437 IPR023213 -
Sto13g2128 449 Pfam Transferase family 3 438 - -
Sto13g2128 449 PANTHER ACYL TRANSFERASE 4 3 441 - -
Sto13g2128 449 PANTHER N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE, PUTATIVE-RELATED 3 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2128 Sto-Chr13 28259429 28261671 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2128 59 391 Monolignol Biosynthesis Gene Families AT5G48930 32.000 4.42e-39 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2128 - - gmx:100817021 665.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2128 13 28259429 28261671 Sto13g2128 13 28259429 28261671 ECH