Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2100 ATGGGCGATTTCCACGATTCTCTCACGCCGCCGCCCCCTAACAACCCCCGCCCGACCCCCGTCCGCGAGGATTGTTGGAGCGAGGAAGCCACCTCCACCCTCGTCGACGCTTGGGGCCGTCGCTTCATGGAGCTCAACCGCGGCAATCTCCGTCAGAAAGACTGGCAGGACGTCGCCGATGCCGTCAATGCCCTCCATGGTCTTACCAAGAAGACGCACCGTACAGATGTTCAGTGTAAGAACCGTATCGATACCATTAAGAAGAAGTATAAGGTTGAAAAGGCTAGGGTTTCGGGCCCAAATGGGGTTCCTTCCTCTTGGCGCTTCTTCGATCGCCTGGACGTTTTGATTGGCCCCAATTTGAATGCGAAGAAGCCGTCTCCTTCGCCTCCCGTAGCACTTCCTTTGTCGTATCGTAAAATCCCTTCGCCTTCCCCCGTATCTGCGGTGCCAGCGACGTCCGTGACGCTGCCGCAGAAGCGATCAGCAACGACGGTATTAGAGGATGGATACTTTAGGAGGAATTATTCAGCGATGGCAGCTGCGGCAGCTGCAGCTGAGGCTGATGAGGATGAAgacgaggaggaggaggaagaagaagatgaagacgaAGAGAGGGGAAGCGAGGTTGAGGAAGGAGAGCGGGAGAAAGAAGGGATGAAGAGGTTGGCAAAGGCAATTGAGAGGTTTGGGGAGATGTATGagagaatggagagagagaaaCTGAGGCAGATGGTGGATTTGGAGAAACAGCGGATGCAGTTCACTAAAGATCTGGAAGTACAAAGGATGCAGATGTTTATGGACACGCAGGTTCAGCTGGAGAGGATCAAGCGCGGGAAGCGATCTGGGTCTAATGGAGGCTCCAAACCGCATGACTCTGATGCAACAAGGCATGGCTGTACCATTGAAGTGATGGGGgcaattaaaagaaaatcagaaaactga 948 0.5 MGDFHDSLTPPPPNNPRPTPVREDCWSEEATSTLVDAWGRRFMELNRGNLRQKDWQDVADAVNALHGLTKKTHRTDVQCKNRIDTIKKKYKVEKARVSGPNGVPSSWRFFDRLDVLIGPNLNAKKPSPSPPVALPLSYRKIPSPSPVSAVPATSVTLPQKRSATTVLEDGYFRRNYSAMAAAAAAAEADEDEDEEEEEEEDEDEERGSEVEEGEREKEGMKRLAKAIERFGEMYERMEREKLRQMVDLEKQRMQFTKDLEVQRMQMFMDTQVQLERIKRGKRSGSNGGSKPHDSDATRHGCTIEVMGAIKRKSEN 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2100 315 MobiDBLite consensus disorder prediction 186 209 - -
Sto13g2100 315 MobiDBLite consensus disorder prediction 277 299 - -
Sto13g2100 315 MobiDBLite consensus disorder prediction 277 315 - -
Sto13g2100 315 Coils Coil 220 240 - -
Sto13g2100 315 MobiDBLite consensus disorder prediction 1 26 - -
Sto13g2100 315 Pfam Myb/SANT-like DNA-binding domain 23 115 IPR044822 -
Sto13g2100 315 PANTHER OS05G0560600 PROTEIN 1 286 - -
Sto13g2100 315 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 1 286 IPR044823 -
Sto13g2100 315 MobiDBLite consensus disorder prediction 182 220 - -
Sto13g2100 315 Coils Coil 181 206 - -
Sto13g2100 315 Gene3D - 26 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2100 Sto-Chr13 28037362 28038846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2100 22 292 Trihelix Transcription Factor Family AT3G14180 32.955 7.13e-48 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Sto13g2100 Myb_DNA-bind_4 6.8e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2100 - - gmx:100785349 372.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2100 13 28037362 28038846 Sto13g2100 13 28037362 28038846 ECH