Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2089 ATGTCAGAGTCAGAAGGATTATTGGAGAATGTTGAAGATCAGAAATATAATTGGAAGGTAAAGAAGAGTATAAATAATGGGAGGTGTAGTGATCAGGAGGACACGAACTCAATTGGATCTTCCCAGAAATGTGGTAGTGGTAGAGagggaaataaaaataataagaataataatgataatgataatgaaagaagaggaagggtgaGACAATATGTTAGATCAAAGATGCCTCGGCTTCGATGGACTCCTGATCTACATCTTTCTTTTGTTCAAGCTGTTGAGAGGCTTGGAGGTCAAGAGAGAGCTACACCCAAATTGGTGCTTCAGCTAATGAATGTGAGAGGGCTCAGCATTGCTCATGTTAAAAGTCATTTGCAGaTGTACCGAAGCAAGAAACTTGATGAGGCTGGACAAGGTGAGTGTTGTCCCAATTAA 435 0.3609 MSESEGLLENVEDQKYNWKVKKSINNGRCSDQEDTNSIGSSQKCGSGREGNKNNKNNNDNDNERRGRVRQYVRSKMPRLRWTPDLHLSFVQAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDEAGQGECCPN 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2089 144 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 27 138 IPR044848 GO:0003700
Sto13g2089 144 MobiDBLite consensus disorder prediction 20 68 - -
Sto13g2089 144 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 27 138 - -
Sto13g2089 144 MobiDBLite consensus disorder prediction 20 53 - -
Sto13g2089 144 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 77 132 IPR006447 GO:0003677
Sto13g2089 144 SUPERFAMILY Homeodomain-like 75 131 IPR009057 -
Sto13g2089 144 Pfam Myb-like DNA-binding domain 79 129 IPR001005 -
Sto13g2089 144 Gene3D - 76 133 - -
Sto13g2089 144 MobiDBLite consensus disorder prediction 54 68 - -
Sto13g2089 144 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 73 133 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2089 Sto-Chr13 27990471 27991570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2089 68 138 G2-like Transcription Factor Family AT2G42660 78.873 1.48e-37 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sto13g2089 Myb_DNA-binding 5.6e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2089 - - pvu:PHAVU_002G239100g 156.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2089 13 27990471 27991570 Sto13g2089 13 27990471 27991570 ECH