Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2087 ATGGGGTTTAGATTTAACCATTATGGATTCTGGGGCAAAATTTATATCGCGTTCCTTTATCTCTGGAGTATTCATTCGTGTTCGTCACTTAATGACGAAGTGACGGCTTTGTTGGAATTCCGGGCTAGAATTGTTCATGATCCTCATGGTGCTTTGGCTAATTGGAAACCCAATGATCCTAATCCTTGTGTGTGGTTGGGTGTTCAATGTGTCGAAGATAAAGTGCAAATGCTGAACCTAAGTGGGCTATCTTTGGCAGGGACACTGGCTCCCGAGCTCGGAAAACTCACTGACTTGAAATCTCTTGTGTTATGCAAGAATAATTTTTCCGGTACCATTCCAAAAGAGCTCGGAGACCTAACTAAGCTGGAGCTGTTGGATTTAAGGGACAATAGCTTGACTGGAAGTATTCCAGCAGAAATTGGCAGGATGTTGTTCCTAAAGCACTTGTTTCTTCTTGGCAACAACGTCAGTGATCCTCAAGATCTTGGGAACCTTGGATTGCTCTCTGAACAGCTGTTTGTTGACAATAGTACATCTCATCTAACAACTGAAATTGGCTGCATGAATAGAAAGTTTGGACATTGTGTGTGGCAGAGCAGTTTCAGACAATGGAGCATGGAAGAGTCGCTAGTCATTCCAATTAAAGGAACAATTGCAAAATATTTCAATGCCTTGGCGCTGCCACTGTTCAAACTACGGAAGGCCCATGGCTATGAAGAGAATTGCTTTGACAATCTGCCTAATGACTCAGGAATTGCTCAGAATGTACTTGTCAATTTCGAGCGTCGTAATTTACTTGATGAGTCCAGTAACCTCGCAGCTGCACCTGTTAGTGTTGCGCCTACCCAGCAGATCATTAGTCTTCCAACTACCATTAGTAGTGGATCTTTCCCAGCTGTGTCAACTGCCCATAATAATCAAAATCAGTCAGCTTCACCACTGCCTGCACCTGCTTCTAATGGGAATGAAGCAAACAGACGATCTCCACCTGCGGATGATGCTTCTGGAACTGAAACTGGAAATGGAATTGCTTGGAAGTACATAATTATTGTGTTAGGCGTGCTTGTGTTGATCATTGTTCTTGTTATCATATTTTGCCTGTGGAATAAACGAGCAGTAAAAGCAATTAGGCCGTGGAAGACAGGATTAAGTGGACAGTTACAGAAAGCTTTTATAACAGGGGTCCCTAAGTTGAATCGAGCAGAGCTGGAGGTAGCCTGTGAGGATTTCAGCAATATCATTACAACCAAGGATCATTACACCGTATATAAGGGAACACTCTCTAGCGGAGTCGAGATTGCTGTTATGTCAACTGTTGTTACTTCTGCTCAAGACTGGTCAAAGAACATGGAGCTGGCCTATCGGAAGAAGATCGATTCATTGTCTCGTGTAAACCATAAGAACTTTATCAATCTTATTGGCTACTGTGAGGAACAAGAGCCATTCACTAGGATGATGGTGTTTGAGTATGCTCCAAATGGAACCGTATTTGAGCATTTGCATGTTGAGGGAGTTGAACATCTTGATTGGAATGCAAGGATGAGGATTATTATGGGCATGGCTTACTGTCTTCAGTATATGCACCATGATCTGAATCCGCCAGTAGCTCATTCCCACCTCGATTCAAATGCAGTCTTATTAACAGATGATTTTGCTGCTAAGATTGCAGAGGCGGCTTTTAGCTCGTCAACCGAAGAGAAATCGAGCTCAAAGAGTTCTGCAACATTGCCACCCCAGGCTGATCCTGAAACAAATGTGTATCACTTTGGAAAAGTACTATTTGAAATTATTTCCGGGAAACTACCTGACTCTGAGGAACAAGGCAAACTGGAGGAGTTGGCTTGTGAATTCTCAAATGGTAAGCGAAGCATCAGCTATATGATTGATCCCTCCCTAAAGTCCTTCAAAGACAAAGAAGTTGATGTGATATGTGAGGTGATTCAAGAGTGCGTCCAATCTAATCCAAGGTTGAGACCAACAATGAAGGACGTGACTTTGAAGCTGAGGGAAACCATTGGTGTATCACCTGAGCAAGCAGTCCCAAGACTTTCTCCACTGTGGTGGGCTGAACTGGAGATCTTGTCGGAGGAGGCGACTTAG 2103 0.4332 MGFRFNHYGFWGKIYIAFLYLWSIHSCSSLNDEVTALLEFRARIVHDPHGALANWKPNDPNPCVWLGVQCVEDKVQMLNLSGLSLAGTLAPELGKLTDLKSLVLCKNNFSGTIPKELGDLTKLELLDLRDNSLTGSIPAEIGRMLFLKHLFLLGNNVSDPQDLGNLGLLSEQLFVDNSTSHLTTEIGCMNRKFGHCVWQSSFRQWSMEESLVIPIKGTIAKYFNALALPLFKLRKAHGYEENCFDNLPNDSGIAQNVLVNFERRNLLDESSNLAAAPVSVAPTQQIISLPTTISSGSFPAVSTAHNNQNQSASPLPAPASNGNEANRRSPPADDASGTETGNGIAWKYIIIVLGVLVLIIVLVIIFCLWNKRAVKAIRPWKTGLSGQLQKAFITGVPKLNRAELEVACEDFSNIITTKDHYTVYKGTLSSGVEIAVMSTVVTSAQDWSKNMELAYRKKIDSLSRVNHKNFINLIGYCEEQEPFTRMMVFEYAPNGTVFEHLHVEGVEHLDWNARMRIIMGMAYCLQYMHHDLNPPVAHSHLDSNAVLLTDDFAAKIAEAAFSSSTEEKSSSKSSATLPPQADPETNVYHFGKVLFEIISGKLPDSEEQGKLEELACEFSNGKRSISYMIDPSLKSFKDKEVDVICEVIQECVQSNPRLRPTMKDVTLKLRETIGVSPEQAVPRLSPLWWAELEILSEEAT 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2087 700 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Sto13g2087 700 Pfam Protein tyrosine and serine/threonine kinase 422 668 IPR001245 GO:0004672|GO:0006468
Sto13g2087 700 Gene3D Transferase(Phosphotransferase) domain 1 493 676 - -
Sto13g2087 700 MobiDBLite consensus disorder prediction 303 327 - -
Sto13g2087 700 Gene3D Phosphorylase Kinase; domain 1 386 491 - -
Sto13g2087 700 ProSiteProfiles Protein kinase domain profile. 287 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2087 700 SUPERFAMILY L domain-like 27 180 - -
Sto13g2087 700 Gene3D Ribonuclease Inhibitor 30 196 IPR032675 -
Sto13g2087 700 PANTHER LRR RECEPTOR-LIKE KINASE 1 700 - -
Sto13g2087 700 MobiDBLite consensus disorder prediction 303 338 - -
Sto13g2087 700 SUPERFAMILY Protein kinase-like (PK-like) 396 667 IPR011009 -
Sto13g2087 700 PANTHER PROTEIN MALE DISCOVERER 2 1 700 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2087 Sto-Chr13 27972422 27976602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2087 67 671 Receptor kinase-like Gene Family AT5G56040 26.970 9.29e-40 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Sto13g2087 PK_Tyr_Ser-Thr 6.5e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2087 - - gmx:100808098 810.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2087 13 27972422 27976602 Sto13g2087 13 27972422 27976602 ECH