Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2085 ATGAATCACGCCCTCGTGTTTAGGTCAGTGATGGAGTACAAGTTATGGTCGCAATATAGGGCCCAGGCTGATCAATCATCACCCAAACGACCAAATATAACGCCCTCTCAATTCCAGTCATGGTTGTGTGATTTGGGATTGATCATGAATATCATGATGACCTTCCATAAAAAATACGAGCTTGGGCGTTTGCTGGGGCAGGGGACATTCGCGAAGGTATACCATGCCAGAAACCTCATCACGGGGCAGCACGTGGCCATGAAGGTAATCGACAAAGAGAAGATCATGCGCGTGGGATTGATCGACCAGATCAAGCGAGAGATCTCGGTGATGAGCATGGTGAGGCACCCGAACATCGTGGAGCTCTACGAGGTGATGGCCAGCAAGAACAAGATCTACTTCGCCATGGAGTTCGTGAAAGGCGGCGAGCTGTTCGCGAAAGTGTCCAAAGGCAAGCTCAAGGAGGATCTGGCCAGGAAGTACTTCCAGCAGTTAATCGGAGCCGTGGATTTCTGCCACAGCAGGGGAGTCTACCACCGCGATCTGAAACCAGAGAATCTGCTCCTGGACGAGAACGGCGACCTCAAAGTTTCCGACTTTGGCCTCAGCGCTCTGTGGGAGTCGAGGAAAACAGACGGGCTTCTTCACACGATGTGTGGGACGCCGGCTTACGTCGCCCCTGAGGTGATCAACAAGAAAGGGTACGACGGAGCCAAGGCAGACATATGGTCCTGTGGGGTGATTCTGTTTGTTCTTCTCGCAGGGTTTCTCCCTTTCCAAGACAGGAACTTGATCGAGATGTATAGGAAGATTAGCAAAGCGGAGTTCAAATACCCCGCGTGGTTCCCTCCGGAGACACGGAAGCTTCTTTCCAGAATCCTCAATCCCAATCCCAGGACACGGATAAGCATCTCCAAGATAATGGAATGCCATTGGTTCAGAAAGAATTACAGCCCCTTATCACTCCCACTCCCACAAGCATCCCCCGAAGATGACGATGACGTGGAAGCTGCATTTATtgaagacgaagatgatgaatccagtaataataataacaactcAATCCCAACGAAGGTGTCCTGTTTCAATGCGTTTGATATCATATCTCTGTCTTCGGGGTTCGACCTGTCTCCTCTGTTTGAGAAAGAGAAATGCCCGAGACAGCAGGCGAGGTTCACGACCACGAAGGAGGCGTCCTTGATTGTGTCGAAGCTGGAGGAGATAGCGCAAGCGGATAGCAAGTTCAAGGTGGTGAAGAAGAATGGTGGGAGGGTGAAACTGCAGGGGAGTAAGTCGGGGAGGAAGGGGCAACTCGGGATAGACGCCGAGATATTTGAGGTGACGTCGTCGTTTCGAATTGTGGAGGTGAAGAAAACGGCGGGAGACACGTTTGAGTATATGGAGTTCAGGGACCATGACTTGAAGCCTTCTTTGAAGGACATTGTGTGGGAATGGCAGCAAGAGACTAGTCATGATCATGAGCAGCAGGAGGAATCTTAA 1500 0.4973 MNHALVFRSVMEYKLWSQYRAQADQSSPKRPNITPSQFQSWLCDLGLIMNIMMTFHKKYELGRLLGQGTFAKVYHARNLITGQHVAMKVIDKEKIMRVGLIDQIKREISVMSMVRHPNIVELYEVMASKNKIYFAMEFVKGGELFAKVSKGKLKEDLARKYFQQLIGAVDFCHSRGVYHRDLKPENLLLDENGDLKVSDFGLSALWESRKTDGLLHTMCGTPAYVAPEVINKKGYDGAKADIWSCGVILFVLLAGFLPFQDRNLIEMYRKISKAEFKYPAWFPPETRKLLSRILNPNPRTRISISKIMECHWFRKNYSPLSLPLPQASPEDDDDVEAAFIEDEDDESSNNNNNSIPTKVSCFNAFDIISLSSGFDLSPLFEKEKCPRQQARFTTTKEASLIVSKLEEIAQADSKFKVVKKNGGRVKLQGSKSGRKGQLGIDAEIFEVTSSFRIVEVKKTAGDTFEYMEFRDHDLKPSLKDIVWEWQQETSHDHEQQEES 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2085 499 Gene3D Kinase associated domain 1, KA1 363 484 - -
Sto13g2085 499 Pfam NAF domain 360 418 IPR004041 GO:0007165
Sto13g2085 499 ProSitePatterns Protein kinases ATP-binding region signature. 65 88 IPR017441 GO:0005524
Sto13g2085 499 SUPERFAMILY Protein kinase-like (PK-like) 56 353 IPR011009 -
Sto13g2085 499 Pfam Protein kinase domain 59 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2085 499 ProSiteProfiles Protein kinase domain profile. 59 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2085 499 Gene3D Transferase(Phosphotransferase) domain 1 52 362 - -
Sto13g2085 499 CDD CIPK_C 363 479 - -
Sto13g2085 499 ProSitePatterns Serine/Threonine protein kinases active-site signature. 177 189 IPR008271 GO:0004672|GO:0006468
Sto13g2085 499 PANTHER - 54 493 - -
Sto13g2085 499 CDD STKc_SnRK3 58 312 - -
Sto13g2085 499 ProSiteProfiles NAF domain profile. 357 381 IPR018451 GO:0007165
Sto13g2085 499 SMART serkin_6 59 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2085 499 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 20 54 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2085 Sto-Chr13 27962497 27966093 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2085 53 486 CBL-interacting serine-threonine protein kinases AT5G45820 66.438 0.0 590
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Sto13g2085 Pkinase 4.3e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2085 K07198 - twl:119989487 622.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2085 13 27962497 27966093 Sto13g2085 13 27962497 27966093 ECH