Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2084 ATGGCGGACGTCGTTTCCAAGAACCCCACGTCCTCCGGCAGCAGTAACGGCAAGGCGAGCGCGAACAATCCGTTGTTGGGTCGCTTCGAAATCGGGAAGCTCCTCGGCCATGGAACTTTCGCGAAGGTGTACCATGCTCGGAACATCAAAACCGGCGAAGGAGTGGCCATCAAGGTGATTGACAAGGAGAAAATCCTCAAGGGCGGCTTAGTGGCTCACATCAAGCGCGAGATCTCCATCCTCCGGCGCGTGCGACACCCCAACATCGTCCAACTCTTCGAGGTAATGGCTACCAAAACCAAGATCTATTTCGTGATGGAATTCGTTCGTGGGGGTGAGCTGTTCAACAAGGTCGCCAAAGGGCGATTGAAAGAGGAAGTGGCGAGGAAGTATTTCCAGCAATTGATTTCCGCGGTAGGGTTCTGCCACGCGAGAGGGGTTTTCCATAGGGATCTCAAGCCTGAGAATTTGTTGCTGGACGAGAATGGTAACCTCAAAGTCTCCGATTTTGGGCTCAGTGCTGTGTCTGATCAAATTACGCAAGATGGGTTGTTCCACACATTTTGTGGGACGCCTGCTTATGTTGCGCCTGAGGTTTTAGCGAGGAAAGGGTATGATGGGGCAAAGGTTGATCTCTGGTCTTGTGGGGTTGTCTTGTTTGTTCTGATGGCTGGGTATTTGCCTTTCCATGACCAGAATATCATGGCAATGTATAAGAAAATCTACAGGGGTGAGTTCAGATGTCCCAAGTGGTTCCATCCTGAGCTATCTCGCCTCCTCACGCGTCTTCTTGATACCAATCCTCAAACCCGGATCTCCATCCCCGAGATTATGGAGAACAGGTGGTTCAAGAAAGGGTTCAAGCAGATTAAGTTCTATGTGGAGGATGATAGGCTTTGTAATTTTGAAGATGAGCTggacaaggaagatgatgatgCAGCAGCATCTGAATCTGACTCCGAGTTAGAGACAAGAAGGAGGAACACTAATGCTTCGTTGCCAAGACCTGCAAGCTTGAATGCTTTTGACATAATCTCATTCTCTCCGGGTTTTGACCTTTCTGGCTTGTTTGAGGAGAAAGGGGATGAAGCAAGGTTTGTATCTGGTGCACCAGTGTCTACGATCATATCAAAACTGGAGGAAATTGCCAAATTGGTGAGCTTTACTGTGAGGAAGAAAGATTGCAGAGTGAGCTTGGAGGGTTCAAGAGAAGGAGTGAAAGGGCCATTGACAATTGCTGCTGAGATATTTGAACTAACTCCTTCATTGGTGGTAGTGGAGGTCAAGAAGAAAGCAGGGGACAAAGCAGAGTATGATCAATTTTGTAACACAGAATTGAAACCTGGGTTGCAGAATTTGATGGCTGAGGAATCTGCTACTTCTTCCCAACTACCAACACCCAGTGGATCATCGGAAGAACTTTCAATAGATATGGCACCTTCACTTTACATACCTTCAGATACTGAATAG 1470 0.4721 MADVVSKNPTSSGSSNGKASANNPLLGRFEIGKLLGHGTFAKVYHARNIKTGEGVAIKVIDKEKILKGGLVAHIKREISILRRVRHPNIVQLFEVMATKTKIYFVMEFVRGGELFNKVAKGRLKEEVARKYFQQLISAVGFCHARGVFHRDLKPENLLLDENGNLKVSDFGLSAVSDQITQDGLFHTFCGTPAYVAPEVLARKGYDGAKVDLWSCGVVLFVLMAGYLPFHDQNIMAMYKKIYRGEFRCPKWFHPELSRLLTRLLDTNPQTRISIPEIMENRWFKKGFKQIKFYVEDDRLCNFEDELDKEDDDAAASESDSELETRRRNTNASLPRPASLNAFDIISFSPGFDLSGLFEEKGDEARFVSGAPVSTIISKLEEIAKLVSFTVRKKDCRVSLEGSREGVKGPLTIAAEIFELTPSLVVVEVKKKAGDKAEYDQFCNTELKPGLQNLMAEESATSSQLPTPSGSSEELSIDMAPSLYIPSDTE 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2084 489 CDD STKc_SnRK3 28 282 - -
Sto13g2084 489 MobiDBLite consensus disorder prediction 456 489 - -
Sto13g2084 489 ProSiteProfiles Protein kinase domain profile. 29 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2084 489 Gene3D Transferase(Phosphotransferase) domain 1 19 335 - -
Sto13g2084 489 CDD CIPK_C 340 451 - -
Sto13g2084 489 SUPERFAMILY Protein kinase-like (PK-like) 26 284 IPR011009 -
Sto13g2084 489 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 23 460 - -
Sto13g2084 489 ProSitePatterns Protein kinases ATP-binding region signature. 35 58 IPR017441 GO:0005524
Sto13g2084 489 MobiDBLite consensus disorder prediction 310 331 - -
Sto13g2084 489 SMART serkin_6 29 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2084 489 MobiDBLite consensus disorder prediction 456 475 - -
Sto13g2084 489 Pfam NAF domain 336 392 IPR004041 GO:0007165
Sto13g2084 489 PANTHER - 23 460 - -
Sto13g2084 489 Gene3D Kinase associated domain 1, KA1 336 455 - -
Sto13g2084 489 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Sto13g2084 489 Pfam Protein kinase domain 29 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2084 489 ProSiteProfiles NAF domain profile. 334 358 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2084 Sto-Chr13 27955193 27956692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2084 18 489 CBL-interacting serine-threonine protein kinases AT4G18700 78.125 0.0 764
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Sto13g2084 Pkinase 2.3e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2084 - - gmx:100790133 807.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2084 13 27955193 27956692 Sto13g2084 13 27955193 27956692 ECH