Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2082 ATGGGAGCTAGGAAAATGAACCCCTTCATTTGCAGATTCTGGATTCTTCTGCTTCTGTTTGTTCTTGTCCAATCTTCTTGCAACAGTACCCACCACGAGCTGTTATCCAAGGCCTTCCAATCCGTCTCTGGGTTTAACATTTCCTGGTTCCAAACACTGGGTTCAACTTCAAACTGCTCTCAAATACATCTTTCTTCCCGGAATCTAAGTGGGGCTATCTCATGGGTTTTTCTCAAGAACATGTCCGACTTGCAGGTTCTTGATCTCTCTGGGAATTCTCTGCAAGGCCACGTGCCAAGCTGGTTGTGGACTCGTCCAAACTTATCGCTAGTCAATCTCTCCCATAACAGATTTGGAGGGAGCATTGGATTCAAACCCACCTCACCTAATTCGTCTTCTTCCATTCAGATGCTCAATCTTTCTCACAATAGGTTCACCAATTTGGTTGAGCTCTCTGGGTTTTCTAAACTCAAAATTCTTGACCTCTCCAGTTGCAATATTAAAGCGAACGTAAAATCCATTTCTGCTCTTCACTCACTCCACTACTTGGACTTGTCAAACAACGCTTTCAATGGTAGCTTCCCCTCCGATTTCCCTCCtctcgaaaccctcaatttcttcaacaTTTCTCGTAACAAGTTTACGATACTAGCTCCCTTAGATAGATACTACAAGAATTTTGGGAAATCGGCTTTTATCGACGCCGGTAATAACATAAATTACAATACATCCAAAACTCCCAATCTCGATTCTGTCCCGCCTCATCCTAAACCCGAATCCGAACCCAAACCGAAAACTCTGGTTCTAACGGTGTCCTCTGCCTCAGCAGTTGTGGTGGTGGTTCTATTGGGAATCTGCGTGTTTTGCATTTGCAGGAAGAGGAGGCGATTGGCGAGGAAGAGCAAATGGGCAATCTCGAAGCCGGTCCCAATGGGCGCAATCAAGGTGGAGAAATCTGGGCCGTTCGCATTCGAGACGGAGTCAGGCATGTCGTGGGTGGCGGACCTGAAGGAGCCGTCGTCTGCGGCGGTGGTGATGTTCGAGAAGCCGCTGATGAACCTCAGCTTCAAGGACTTGATCGCCGCCACGTCTCACTTCGGGAGGGACTCGCTGCTGGCGGAGGGTAGGTGTGGGCCCGTTTACAGAGCCGTCATCCCCGGTGATATCGACGTGGCAATCAAAGTCCTCGAAAATGCAAGAGACCTTGATCCTCACGACGCCATCGCCTTCCTCGTTGATCTCTCTAAGCTCAGACACCCCAATTTGCTTCCACCCTCCGGTTACTGTATTGCAGGTAAGGAGAAGCTGGTTTTGTACGAGTTTATGTCAAACGGCGATTTGGGGAGGTGGCTACATGAGCTGCCAACGGGGGAGACTAACGTGGAGGATTGGACGAGTGACACGTGGGAGATTCAAAACGGAGGAGGGTCCCAACACTCGTCGCCGGAGAAGATGGGTTGGCTAACACGACACCGTATTGCCGTCGGTATAGCGCGTGGGCTAGCCTATCTTCACCACGCGGGGTCAAAGCCCGTGGTCCATGGCCACCTAGTGACTTCTAACATCTTACTCGCCGATGACTTCGAGCCGCGAATCGCCGATTTCGGGTTCCGAGAGATCGAGAAGGGGCGGAACGCGAATTGCAGCACCGAGACGGACGTTTATTGTTTCGGTGTGGTGCTGATGGAGCTGTTGACGGGGAAGGCCGGCACGGCGGATACGGTGGTGTGGGTGAGGAAGGCGGTGAGGGAGGGCCACGGGGTGCGCGCGTTGGACGAGAGTTTGAAACTCGGTTGCGACTCGGAAGGCGAGATGGTGGAGAGCCTCCGAGTCGCGTACTTGTGTACGGCCGAGTCACCAGGGAAAAGGCCCACCATGCAGCAAGTCCTAGGTTTGCTCAAGGATATTCATATCCACGACGGACTCGACCCGAGTTGA 1938 0.5114 MGARKMNPFICRFWILLLLFVLVQSSCNSTHHELLSKAFQSVSGFNISWFQTLGSTSNCSQIHLSSRNLSGAISWVFLKNMSDLQVLDLSGNSLQGHVPSWLWTRPNLSLVNLSHNRFGGSIGFKPTSPNSSSSIQMLNLSHNRFTNLVELSGFSKLKILDLSSCNIKANVKSISALHSLHYLDLSNNAFNGSFPSDFPPLETLNFFNISRNKFTILAPLDRYYKNFGKSAFIDAGNNINYNTSKTPNLDSVPPHPKPESEPKPKTLVLTVSSASAVVVVVLLGICVFCICRKRRRLARKSKWAISKPVPMGAIKVEKSGPFAFETESGMSWVADLKEPSSAAVVMFEKPLMNLSFKDLIAATSHFGRDSLLAEGRCGPVYRAVIPGDIDVAIKVLENARDLDPHDAIAFLVDLSKLRHPNLLPPSGYCIAGKEKLVLYEFMSNGDLGRWLHELPTGETNVEDWTSDTWEIQNGGGSQHSSPEKMGWLTRHRIAVGIARGLAYLHHAGSKPVVHGHLVTSNILLADDFEPRIADFGFREIEKGRNANCSTETDVYCFGVVLMELLTGKAGTADTVVWVRKAVREGHGVRALDESLKLGCDSEGEMVESLRVAYLCTAESPGKRPTMQQVLGLLKDIHIHDGLDPS 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2082 645 ProSiteProfiles Protein kinase domain profile. 366 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2082 645 PANTHER KINASE, PUTATIVE-RELATED 9 163 - -
Sto13g2082 645 PANTHER KINASE, PUTATIVE-RELATED 160 643 - -
Sto13g2082 645 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 160 643 - -
Sto13g2082 645 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 9 163 - -
Sto13g2082 645 Gene3D Transferase(Phosphotransferase) domain 1 442 541 - -
Sto13g2082 645 Gene3D Transferase(Phosphotransferase) domain 1 542 640 - -
Sto13g2082 645 SUPERFAMILY L domain-like 42 219 - -
Sto13g2082 645 ProSiteProfiles Leucine-rich repeat profile. 134 155 IPR001611 GO:0005515
Sto13g2082 645 Gene3D Ribonuclease Inhibitor 128 252 IPR032675 -
Sto13g2082 645 MobiDBLite consensus disorder prediction 244 263 - -
Sto13g2082 645 Gene3D Ribonuclease Inhibitor 22 127 IPR032675 -
Sto13g2082 645 Pfam Protein tyrosine and serine/threonine kinase 371 630 IPR001245 GO:0004672|GO:0006468
Sto13g2082 645 Gene3D Phosphorylase Kinase; domain 1 326 441 - -
Sto13g2082 645 Pfam Leucine rich repeat 64 118 IPR001611 GO:0005515
Sto13g2082 645 SUPERFAMILY Protein kinase-like (PK-like) 345 633 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2082 Sto-Chr13 27934696 27936769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2082 31 636 Receptor kinase-like Gene Family AT5G07280 30.468 1.25e-71 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Sto13g2082 PK_Tyr_Ser-Thr 8.2e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2082 - - gmx:100807390 862.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2082 13 27934696 27936769 Sto13g2082 13 27934696 27936769 CCT