Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2078 ATGTCTGCTTCTGTTGTCAATGGGAACGAATCACTCACTAGTCACATCATATCTACAACAATTGGAGGCAAAAATGGGGAGCCCAAACAGACTATTAGCTACATGGCAGAACGTGTTGTGGGAACTGGATCATTTGGGATTGTTTTCCAGGCAAAATGCTTGGAAACTGGTGAGGTAGTGGCCATTAAAAAGGTTTTGCAAGACAGAAGATATAAAAACCGTGAACTACAGTTAATGCGTGTGATGGATCATCCTAATGTGATCTCCTTGAAGCATTGTTTCTTTTCCACTACAAGTACCAACGAACTATATCTTAATTTGGTGATGGAATATGTTTCAGAGAGCATGTATCAGTTCTTGATAAAAATCTTTGTTGGGATGAAGATTTTCAGGGGGCTAGCTTATATCCACACTGTTCCTGGAGTTTGCCACAGATATTTGAAACCTCAAAATATACTGGTTGATCCTTTTACACATCAGGTTAAACTATGTGATTTTGGAAGTGCAAAAGTGCTAGTCAACGGAGAAGCTAATATATCATACATATGTTCCCGCTTCTATCGAGCCCCGGAACTTATATTTGGTGCCACGGAGTATACTACTTCAATTGACATTTGGTCAGCTGGCTGTGTCCTAGCTGAACTTCTTTTAGGCCAGGTTCTTGGCACACCAACTCGGGAGGAAGTTCGTTGCATGAATCCCAATTACAATGACTTTAGGTTTCCACAGATCAAAGCACACCATGGCATAAGGATGCCCCCGGAAGCAATAGATCTCGCTTCTAGGCTTTTGCAATACTCCCCAAGTCTTCGGTGCACTGCGCTAGAAGCATGTGCACATTCTTTCTTTGATGAACTTAGAGAACCCAATGCACGCCTGCCAAATGGTAGGCCATTTCCACCTCTATTCAACTTCAAACAGGAATTATCTATAGCATCTCCAGAGCTTGTTAACAAGTTAATACCAGACCATGTGAAGCGTTGA 984 0.4187 MSASVVNGNESLTSHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGEVVAIKKVLQDRRYKNRELQLMRVMDHPNVISLKHCFFSTTSTNELYLNLVMEYVSESMYQFLIKIFVGMKIFRGLAYIHTVPGVCHRYLKPQNILVDPFTHQVKLCDFGSAKVLVNGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQVLGTPTREEVRCMNPNYNDFRFPQIKAHHGIRMPPEAIDLASRLLQYSPSLRCTALEACAHSFFDELREPNARLPNGRPFPPLFNFKQELSIASPELVNKLIPDHVKR 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2078 327 Pfam Protein kinase domain 34 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2078 327 PANTHER SHAGGY-RELATED PROTEIN KINASE ETA 1 327 - -
Sto13g2078 327 Gene3D Transferase(Phosphotransferase) domain 1 118 326 - -
Sto13g2078 327 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 1 327 - -
Sto13g2078 327 CDD STKc_GSK3 29 286 IPR039192 -
Sto13g2078 327 ProSiteProfiles Protein kinase domain profile. 34 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2078 327 SUPERFAMILY Protein kinase-like (PK-like) 33 310 IPR011009 -
Sto13g2078 327 ProSitePatterns Protein kinases ATP-binding region signature. 40 64 IPR017441 GO:0005524
Sto13g2078 327 Gene3D Phosphorylase Kinase; domain 1 19 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2078 Sto-Chr13 27894432 27897211 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2078 38 321 MAP Kinase Gene Family AT3G59790 32.209 4.17e-40 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Sto13g2078 Pkinase 1.1e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2078 K14502 - gmx:100779909 580.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2078 13 27894432 27897211 Sto13g2078 13 27894432 27897211 CCT