Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2075 ATGAAGCAAAGCAAAGCGACTAGAAACTCAGCAGTGAAGATCCCAGTAAAAAGTTTCGCACTTTTtgggtttggttcgatttgttGTTTCATGCGAGATGTAAAGCGAGTCGGTTGGCTCATCTTCTTTCTGTGGAATTCTTTGGCAATGGCTGGTGGCACGAACAGTCTTCTTTCTCCAAAGGGTGTGAACTATGAAGTGGCTGCTTTGATGTCGATgaagaataaaatgaaagaCGAATTGCGAGTTATGGATGGTTGGGATATTAATTCGGTTGATCCTTGTACTTGGAACATGGTCGGTTGCTCTGCTGAGGGTTATGTGATTTCCCTGGACATGGCCAGTATGGATTTATCTGGAACCCTTTCCCCAGGCATTGGGAATTTGAGCCACCTCCGAACATTgTTATTGCAGAACAATCAGTTATCAGGTCCCATTCCTGGTGAGATAGGAAAGCTTTTGGAGCTTCAGACTCTTGACCTCTCTGGTAACCAGTTTGTTGGTGAAATTCCTAGTTCTTTGGGCTCTTTGACTCACCTAAGTTACTTGCGGCTCAGTAGAAACAATCTGTCTGGACAGATTCCTCATCTCATTGCAAATCTCACAGGCCTGTCATTCTTGGACTTGTCATTCAATAATCTCAGTGGCCCCACTCCAAAAATTTTAGCTAAAGGTTACAGTATTTCAGGAAACAATTTCCTCTGTACATCTTCATCAGCACAAATTTGTGTGGGTGTTTCAGAACCATTCAATgGTTCATCTCCAGAAGTTGGTAGTCATCGCCATTGGGTGCTTTCTGTTGCTATTGGTATTAGTTGCACATTTGTAATTTCAGTAATGCTACTCATCTATTGGGTGCATTGGTACAGGTCACGCATCCTCTGCACATCTTATGTAGAGCAAGATTCTGAGTTTGACATTGGTCATTTGAAGAGGTTTTCCTTCCGTGAATTACAATCTGCTACAAGCAATTTCAGTCCAAAAAATATCCTAGGACAAGGTGGATTTGGTGTTGTCTACAAAGGATGTCTTCCAAATAAAATGATGGTGGCAGTGAAGAGGCTGAAAGATCCCAATTACACTGGAGAAGTGCAGTTTCAAACTGAAGTTGAAATGATCGGCTTGGCAGTGCATAGGAATCTCTTACGTCTCTATGGCTTTTGTATGACATCCGATGAGAGATTACTTGTTTACCCTTACATGCCTAATGGCAGTGTTGCTGATCGCTTGAGAGACACTTGCCGTGAAAAGCCATCATTGGACTGGAACAGACGAATGCGAATTGCTCTTGGGGCTGCACGTGGGCTTCTATATTTACATGAACAGTGCAACCCAAAAATTATCCACAGGGATGTTAAGGCTGCTAACATTTTACTAGATGAAAGCTTTGAAGCTGTGGTGGGGGATTTTGGTCTCGCCAAGCTCTTGGATCAAAGAGATTCACATGTCACTACTGCAGTACGAGGCACTGTAGGGCACATTGCCCCAGAGTATCTCTCCACTGGACAGTCTTCTGAAAAAACTGATGTTTTCGGATTTGGCATATTACTTTTGGAGCTCATTACAGGACAAAAGGCATTGGATGCTGGAAATGGTCAGGTCCAGAAGGGAATGATTCTTGATTGGGTTAAAACCTTATATGAAGAGAAGCGGCTGGAAGTTCTAGTAGATAGGGATCTGAGGGGACGTTTTGATCCAATAGAGTTGGAAAAAGCAGTGGATTTGTTATTACAGTGTACTCAATCGCATCCCGGCCTTCGGCCAAAGATGTCGGAAGTCTTGAAGATCCTGGAAGGGCTAGTTGGGCAAGGGCAGCCGGAGGAGTCTCGAGGCGGAGCAGCTGAGGGCAGCTTGGGTGAAGGAACTAGTATACGTGGAGATGAGACTTCAAAAGAGGTGGATAAGGATCCAGGATTGAGTAAGGAACTAAAGGATGGGCCTGAAGAAGCTGTGGACGAGGACATGCGAAATTTGGTTAGCGAGGCAGTACCTGAGACCGTGGTTGTAATAGATTCTGCTGAGACAGGGCATGTGAATAGAGATAATAGGAAGTTGGAAGTGAAGGTGAATGAATCAGGGTTGAGCAAGGTAACCATGAGAGCTCCTAAAGGGGCGTCTGAAGCAGATAAGAATTCATGTGTGATTGATATAAAGTGTAGTAGCCGCCAAGAGTATAGCGAGAATTTGGAGGGTGAAAGGATTTGTAGGATTTGCCATCTGGCTGCTGGGCAACCATCAGATGCAACAGCTGCTAGTACTAATAGCAGTGCAACTACTGGAGATTTAATTCAGCTTGGCTGTGCGTGTAAAGATGAGCTAGGTATTGCACACAGTCATTGTGCTGAGGCATGGTTCAAGCTAAAAGGAAACAGATTGTGCGAAATATGTGGTGAGACTGCAAAAAATGTGTCGGGTGTTACCGATGCTGGATTTATGGAAGAGTGGAATGAAAGAAGATTATTGACAGCAGTAATACCTCGTCAGGCATATGTGGTGGATGCTGGCGAGGACAGCCATTTTTTTCAGCATTTACCTGGCTTCTACAATTCAAAAAGAATCCACTGTCATGTTGTGGAAATTAAAGGTGTTTATTTTCTTCTTGTGGTATTTGACATTTGTGAATTCATCAATATCTCTGGTTGTCGTTTCCTTGTGAATATCATACTAGagtggagtgaagaagaagagaggataTTAGTAGAAACACATGCGAAGGTGGGGAATCGTTGGGCAGAAATAGCGAAGAGCATTCCAGGGAGAACAGAGAATGCAATAAAGAACCACTGGAATGCCACTAAAAGAAGGCAGAATTcaaggagaaagaagaagaacacacaaagaTCGAATCGGTCAAAGCCACACTCCTCTGTACTTGAAGACTACATCAGAAGCAAGAACCTTAGTAACTCCTCCATCAACACCAACACTATCCAGAACATAATCCCAGAAATCCAATCTGAACCCTCCTCTGAATCTGTAATGAATAATGAGGAATACCCATCATTTATAGCTGATCCAATCGACGATGAATTGCTGTATTTGCAGCATTTGTACGCAGAGAATCAGAATCAGAATCAGCAACCTCTGGTGGATGATGTTAAGCAGTCTGGGAATTCTTCTTCAACTTCCTACTTCTTGTTGGACTTTTGTCAAACAGATGGTGAGCGCCGTACTGAAGGTGGAGGATTGGCCTATTCCAATGAGAGCCTACTAGCTAAGGAGGCTGCTACTTCCACATTAAAGTCCCTCAATCTGATCTTATCTCTCTCACTTGCTCAATGGAACACCCCATTCATCTTTTTCCTCTGGCTATGA 3315 0.4238 MKQSKATRNSAVKIPVKSFALFGFGSICCFMRDVKRVGWLIFFLWNSLAMAGGTNSLLSPKGVNYEVAALMSMKNKMKDELRVMDGWDINSVDPCTWNMVGCSAEGYVISLDMASMDLSGTLSPGIGNLSHLRTLLLQNNQLSGPIPGEIGKLLELQTLDLSGNQFVGEIPSSLGSLTHLSYLRLSRNNLSGQIPHLIANLTGLSFLDLSFNNLSGPTPKILAKGYSISGNNFLCTSSSAQICVGVSEPFNGSSPEVGSHRHWVLSVAIGISCTFVISVMLLIYWVHWYRSRILCTSYVEQDSEFDIGHLKRFSFRELQSATSNFSPKNILGQGGFGVVYKGCLPNKMMVAVKRLKDPNYTGEVQFQTEVEMIGLAVHRNLLRLYGFCMTSDERLLVYPYMPNGSVADRLRDTCREKPSLDWNRRMRIALGAARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDQRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQKALDAGNGQVQKGMILDWVKTLYEEKRLEVLVDRDLRGRFDPIELEKAVDLLLQCTQSHPGLRPKMSEVLKILEGLVGQGQPEESRGGAAEGSLGEGTSIRGDETSKEVDKDPGLSKELKDGPEEAVDEDMRNLVSEAVPETVVVIDSAETGHVNRDNRKLEVKVNESGLSKVTMRAPKGASEADKNSCVIDIKCSSRQEYSENLEGERICRICHLAAGQPSDATAASTNSSATTGDLIQLGCACKDELGIAHSHCAEAWFKLKGNRLCEICGETAKNVSGVTDAGFMEEWNERRLLTAVIPRQAYVVDAGEDSHFFQHLPGFYNSKRIHCHVVEIKGVYFLLVVFDICEFINISGCRFLVNIILEWSEEEERILVETHAKVGNRWAEIAKSIPGRTENAIKNHWNATKRRQNSRRKKKNTQRSNRSKPHSSVLEDYIRSKNLSNSSINTNTIQNIIPEIQSEPSSESVMNNEEYPSFIADPIDDELLYLQHLYAENQNQNQQPLVDDVKQSGNSSSTSYFLLDFCQTDGERRTEGGGLAYSNESLLAKEAATSTLKSLNLILSLSLAQWNTPFIFFLWL 1104
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2075 1104 CDD SANT 890 933 IPR001005 -
Sto13g2075 1104 MobiDBLite consensus disorder prediction 604 652 - -
Sto13g2075 1104 SUPERFAMILY RING/U-box 732 799 - -
Sto13g2075 1104 MobiDBLite consensus disorder prediction 932 949 - -
Sto13g2075 1104 Gene3D - 890 958 - -
Sto13g2075 1104 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Sto13g2075 1104 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 891 937 IPR017930 -
Sto13g2075 1104 SMART sant 887 935 IPR001005 -
Sto13g2075 1104 SMART ringv_2 734 797 IPR011016 GO:0008270
Sto13g2075 1104 SUPERFAMILY L domain-like 65 234 - -
Sto13g2075 1104 MobiDBLite consensus disorder prediction 924 956 - -
Sto13g2075 1104 Pfam Protein kinase domain 328 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2075 1104 SUPERFAMILY Homeodomain-like 889 940 IPR009057 -
Sto13g2075 1104 Gene3D Transferase(Phosphotransferase) domain 1 401 605 - -
Sto13g2075 1104 SUPERFAMILY Protein kinase-like (PK-like) 309 597 IPR011009 -
Sto13g2075 1104 ProSiteProfiles Myb-like domain profile. 891 933 IPR001005 -
Sto13g2075 1104 ProSiteProfiles Zinc finger RING-CH-type profile. 727 803 IPR011016 GO:0008270
Sto13g2075 1104 ProSiteProfiles Protein kinase domain profile. 325 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2075 1104 Gene3D Ribonuclease Inhibitor 63 245 IPR032675 -
Sto13g2075 1104 CDD RING_CH-C4HC3_MARCH 735 797 - -
Sto13g2075 1104 Pfam Myb-like DNA-binding domain 890 930 IPR001005 -
Sto13g2075 1104 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 42 610 - -
Sto13g2075 1104 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 728 801 IPR013083 -
Sto13g2075 1104 Pfam RING-variant domain 735 796 IPR011016 GO:0008270
Sto13g2075 1104 Gene3D Phosphorylase Kinase; domain 1 295 400 - -
Sto13g2075 1104 Pfam Leucine rich repeat N-terminal domain 64 103 IPR013210 -
Sto13g2075 1104 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 42 610 - -
Sto13g2075 1104 ProSitePatterns Protein kinases ATP-binding region signature. 331 353 IPR017441 GO:0005524
Sto13g2075 1104 SMART serkin_6 325 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2075 1104 MobiDBLite consensus disorder prediction 625 652 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Sto13g2075 Sto-Chr13 27872851 27887640 Dispersed/Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2075 71 603 Receptor kinase-like Gene Family AT5G45780 74.813 0.0 813
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Sto13g2075 Pkinase 1.1e-44 CL0016
TF MYB-related Sto13g2075 Pkinase 1.1e-44 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2075 - - gmx:100810610 981.859
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2075 13 27872851 27887640 Sto13g2065 13 27808119 27810353 CCT