Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2074 ATGGGAGCTAGGAAAATGAACCCCTTCATTTGCAGATTCTGGATTCTTCTGCTTCTGTTTGTTCTTGTCCAATCTTCTTGCAACAGTACCCACCACGAGCTGTTATCCAAGGCCTTCCAATCCGTCTCTGGGTTTAACATTTCCTGGTTCCAAACACTGGGTTCAACTTCAAACTGCTCTCAAATACATCTTTCTTCCCGGAATCTAAGTGGGGCTATCTCATGGGTTTTTCTCAAGAACATGTCCGACTTGCAGGTTCTTGATCTCTCTGGGAATTCTCTGCAAGGCCACGTGCCAAGCTGGTTGTGGACTCGTCCAAACTTATCGCTAGTCAATCTCTCCCATAACAGATTTGGAGGGAGCATTGGATTCAAACCCACCTCACCTAATTCGTCTTCTTCCATTCAGATGCTCAATCTTTCTCACAATAGGTTCACCAATTTGGTTGAGCTCTCTGGGTTTTCTAAACTCAAAATTCTTGACCTCTCCAGTTGCAATATTAAAGCGAACGTAAAATCCATTTCTGCTCTTCACTCACTCCACTACTTGGACTTGTCAAACAACGCTTTCAATGGTAGCTTCCCCTCCGATTTCCCTCCtctcgaaaccctcaatttcttcaacaTTTCTCGTAACAAGAAGAGGAGGCGATTGGCGAGGAAGAGCAAATGGGCAATCTCGAAGCCGGTCCCAATGGGCGCAATCAAGGTGGAGAAATCTGGGCCGTTCGCATTCGAGACGGAGTCAGGCATGTCGTGGGTGGCGGACCTGAAGGAGCCGTCGTCTGCGGCGGTGGTGATGTTCGAGAAGCCGCTGATGAACCTCAGCTTCAAGGACTTGATCGCCGCCACGTCTCACTTCGGGAGGGACTCGCTGCTGGCGGAGGGTAGGTGTGGGCCCGTTTACAGAGCCGTCATCCCCGGTGATATCGACGTGGCAATCAAAGTCCTCGAAAATGCAAGAGACCTTGATCCTCACGACGCCATCGCCTTCCTCGTTGATCTCTCTAAGCTCAGACACCCCAATTTGCTTCCACCCTCCGGTTACTGTATTGCAGGTAAGGAGAAGCTGGTTTTGTACGAGTTTATGTCAAACGGCGATTTGGGGAGGTGGCTACATGAGCTGCCAACGGGGGAGACTAACGTGGAGGATTGGACGAGTGACACGTGGGAGATTCAAAACGGAGGAGGGTCCCAACACTCGTCGCCGGAGAAGATGGGTTGGCTAACACGACACCGTATTGCCGTCGGTATAGCGCGTGGGCTAGCCTATCTTCACCACGCGGGGTCAAAGCCCGTGGTCCATGGCCACCTAGTGACTTCTAACATCTTACTCGCCGATGACTTCGAGCCGCGAATCGCCGATTTCGGGTTCCGAGAGATCGAGAAGGGGCGGAACGCGAATTGCAGCACCGAGACGGACGTTTATTGTTTCGGTGTGGTGCTGATGGAGCTGTTGACGGGGAAGGCCGGCACGGCGGATACGGTGGTGTGGGTGAGGAAGGCGGTGAGGGAGGGCCACGGGGTGCGCGCGTTGGACGAGAGTTTGAAACTCGGTTGCGACTCGGAAGGCGAGATGGTGGAGAGCCTCCGAGTCGCGTACTTGTGTACGGCCGAGTCACCAGGGAAAAGGCCCACCATGCAGCAAGTCCTAGGTTTGCTCAAGGATATTCATATCCACGACGGACTCGACCCGAGTTGA 1701 0.5209 MGARKMNPFICRFWILLLLFVLVQSSCNSTHHELLSKAFQSVSGFNISWFQTLGSTSNCSQIHLSSRNLSGAISWVFLKNMSDLQVLDLSGNSLQGHVPSWLWTRPNLSLVNLSHNRFGGSIGFKPTSPNSSSSIQMLNLSHNRFTNLVELSGFSKLKILDLSSCNIKANVKSISALHSLHYLDLSNNAFNGSFPSDFPPLETLNFFNISRNKKRRRLARKSKWAISKPVPMGAIKVEKSGPFAFETESGMSWVADLKEPSSAAVVMFEKPLMNLSFKDLIAATSHFGRDSLLAEGRCGPVYRAVIPGDIDVAIKVLENARDLDPHDAIAFLVDLSKLRHPNLLPPSGYCIAGKEKLVLYEFMSNGDLGRWLHELPTGETNVEDWTSDTWEIQNGGGSQHSSPEKMGWLTRHRIAVGIARGLAYLHHAGSKPVVHGHLVTSNILLADDFEPRIADFGFREIEKGRNANCSTETDVYCFGVVLMELLTGKAGTADTVVWVRKAVREGHGVRALDESLKLGCDSEGEMVESLRVAYLCTAESPGKRPTMQQVLGLLKDIHIHDGLDPS 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2074 566 SUPERFAMILY L domain-like 43 213 - -
Sto13g2074 566 Pfam Protein tyrosine and serine/threonine kinase 292 551 IPR001245 GO:0004672|GO:0006468
Sto13g2074 566 PANTHER KINASE, PUTATIVE-RELATED 213 564 - -
Sto13g2074 566 PANTHER KINASE, PUTATIVE-RELATED 9 163 - -
Sto13g2074 566 PANTHER KINASE, PUTATIVE-RELATED 156 213 - -
Sto13g2074 566 Gene3D Phosphorylase Kinase; domain 1 247 362 - -
Sto13g2074 566 ProSiteProfiles Protein kinase domain profile. 287 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g2074 566 Pfam Leucine rich repeat 64 118 IPR001611 GO:0005515
Sto13g2074 566 Gene3D Ribonuclease Inhibitor 22 128 IPR032675 -
Sto13g2074 566 Gene3D Ribonuclease Inhibitor 129 224 IPR032675 -
Sto13g2074 566 ProSiteProfiles Leucine-rich repeat profile. 134 155 IPR001611 GO:0005515
Sto13g2074 566 Gene3D Transferase(Phosphotransferase) domain 1 463 561 - -
Sto13g2074 566 Gene3D Transferase(Phosphotransferase) domain 1 363 462 - -
Sto13g2074 566 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 9 163 - -
Sto13g2074 566 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 213 564 - -
Sto13g2074 566 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 156 213 - -
Sto13g2074 566 SUPERFAMILY Protein kinase-like (PK-like) 266 554 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2074 Sto-Chr13 27868190 27870262 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2074 31 557 Receptor kinase-like Gene Family AT5G07280 28.816 3.84e-65 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Sto13g2074 PK_Tyr_Ser-Thr 6.9e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2074 - - qlo:115992224 674.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2074 13 27868190 27870262 Sto13g2074 13 27868190 27870262 ECH