Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2056 ATGGAGAATTGTAATGAATGGAAGCCTTTTGCAGCAATGATAGCTATTGATTTTGCTTTTGCTCTTGTCAATATTCTTGTCAAGAAGCTCCTTCAAGATGGGATTAACCATTTGGTTTTCATCACTTACCGCTTGACTATTTCTGCCCTTTTCTTAGCACCAATTGCTTTCATTTCTGAAagAAACTGTAGGCCAAGGCTGACGTTTCGAATTTTATGTTACCTCTTCTTCAGTGCCATACTTGGGGCATCGGTGACACAGTACTTGTACCTTCTGGGAATCCAATACACTTCAGCTACGTTTGCTTGTGCCTTTCTTAACATCGTCCCTGTGGTCACCTTCATAATGGCATTACCATTTGGGTTGGAGAGTGTGAACATAAAAAGCAAGAGTGGGAAAGGGAAGATAATTGGCACAGTGATATGCATTGGTGGTGCATTGTTGTTGACACTGTACAAAGGAAAGCCATTGTTCAATGATAACTATTGTGATCATCATCACAATGTGGAGAGTAGTGCAATATTGAAGGTAGCTAATTCCCCTGCCAGGAATGCAAAGAGATGGAGTGTTGGTGTGATAGCTTTGATTGTGGGGACACTATTTTGGGCATCTTGGTTTATATTGCAAGCAAATATAGGGAAGAGGTACCCTTGCCAGTATTCTAGCACAGCCATCATGACCTCTTTTGCAGCCATTCAATCTGCTGTTCTTAGCTTCTCCACTGGTCACACCTTGTCCATGTGGCTCCTCAAGGGAAAGTTGCAAATTCTCACTGTTCTCTTTTCTGGAATGGTAGGATCAGGAATGTGCTTTGTAGGGTTGTCATGGTGTGTGAAGAAGAAGGGTCCTCTCTTCACTTCAGCATTCAGCCCTCTGGTTCAGATTATGGTTGCCTTCATTGATGTCCCTTTCTTGCATGAGCAGCTCCATCTTGGAAGTTTGATTGGATCCATTTTGGTGATGATAGGATTGTACATTCTGCTGTGGGCTAACAAGAAGGAGATGCAGAATCATGTCACTGTGTGA 1026 0.425 MENCNEWKPFAAMIAIDFAFALVNILVKKLLQDGINHLVFITYRLTISALFLAPIAFISERNCRPRLTFRILCYLFFSAILGASVTQYLYLLGIQYTSATFACAFLNIVPVVTFIMALPFGLESVNIKSKSGKGKIIGTVICIGGALLLTLYKGKPLFNDNYCDHHHNVESSAILKVANSPARNAKRWSVGVIALIVGTLFWASWFILQANIGKRYPCQYSSTAIMTSFAAIQSAVLSFSTGHTLSMWLLKGKLQILTVLFSGMVGSGMCFVGLSWCVKKKGPLFTSAFSPLVQIMVAFIDVPFLHEQLHLGSLIGSILVMIGLYILLWANKKEMQNHVTV 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2056 341 Pfam EamA-like transporter family 13 150 IPR000620 GO:0016020|GO:0016021
Sto13g2056 341 Pfam EamA-like transporter family 191 328 IPR000620 GO:0016020|GO:0016021
Sto13g2056 341 PANTHER WAT1-RELATED PROTEIN 9 335 IPR030184 GO:0016021|GO:0022857
Sto13g2056 341 SUPERFAMILY Multidrug resistance efflux transporter EmrE 257 333 - -
Sto13g2056 341 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 153 - -
Sto13g2056 341 PANTHER WAT1-RELATED PROTEIN 9 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2056 Sto-Chr13 27756264 27759443 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2056 5 336 Nodulin-like Gene Family AT1G11460 39.640 4.35e-85 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2056 - - gmx:100803670 483.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2056 13 27756264 27759443 Sto13g2056 13 27756264 27759443 CCT