Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2047 ATGGACAGGAgcttcaacaacaacaacagcaGCCCATATATCAGTGAACAAGATGACACTGACATAGCTCAAGAAAACATTGCAGAGTCCCCTCCTTCAGCTGTCTTTAACGTTGATAGTTTGGTCACTTCCACTTCTTCCCCTAAAAGAAGGTGTGTGATTGAAATGCATAAGAAATGGGATTTTGGTTTCAGCAGGAGAGCCATACAAAAGAGGGTGGTGCATATTCCAATCAAGGAAGTAGAGGGATCTCGGCTTAAAGGAGAGAGTAATACTCCACCATCGGATTCATGGGCTTGGAGAAAGTATGGCCAGAAACCCATCAAAGGCTCCCCTTACCCCAGAGGGTACTATAGGTGCAGCAGTTCCAAGGGCTGCCCAGCAAGAAAACAAGTGGAAAGGAGCCGCGTGGACCCCACCATGATCGTCGTAACCTACTCTTGCGAGCACAACCACCCCTGGCCGGCTTCTAGAAACCACCACCACAACAAATCCGCCGCCAATAAACCCCTCGCCGCGCCCGAACCGGAACCCGAGCCCGTCGAGAACCGAGTCGACCACGATCCCGAACCGGAGCCGGAACCAGAGTCGTCCGACAAGTTCGCGGACCTCGGGGACGAGTCCCTGATCACGACGGCGGACGAGTTAGGTTGGTTCAGCGAAATGGAAGGGACGGCGACGACGTCGTCGGCTGTTCTGGAGAGTACGATCCTGACAGGGGACGACGCTGACGTGGCGTCGATGTTCCTGCCGATGAGGGAGGAGGACGAGTCGCTGTTCGCGGACCTGGGGGAGCTGCCGGAGTGCTCGGTGGTGTTCCGGCGAGGTGCGGTGGAGAGGGAGGAGGAGCGACGGCGGTGCGCGGCCACGTGGTGTGGGACCACAAGTTGA 891 0.5522 MDRSFNNNNSSPYISEQDDTDIAQENIAESPPSAVFNVDSLVTSTSSPKRRCVIEMHKKWDFGFSRRAIQKRVVHIPIKEVEGSRLKGESNTPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPTMIVVTYSCEHNHPWPASRNHHHNKSAANKPLAAPEPEPEPVENRVDHDPEPEPEPESSDKFADLGDESLITTADELGWFSEMEGTATTSSAVLESTILTGDDADVASMFLPMREEDESLFADLGELPECSVVFRRGAVEREEERRRCAATWCGTTS 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2047 296 SMART WRKY_cls 94 154 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto13g2047 296 MobiDBLite consensus disorder prediction 1 30 - -
Sto13g2047 296 ProSiteProfiles WRKY domain profile. 95 155 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto13g2047 296 PANTHER WRKY TRANSCRIPTION FACTOR 65-RELATED 1 280 - -
Sto13g2047 296 MobiDBLite consensus disorder prediction 179 203 - -
Sto13g2047 296 Pfam WRKY DNA -binding domain 96 153 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto13g2047 296 SUPERFAMILY WRKY DNA-binding domain 92 155 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto13g2047 296 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 280 IPR044810 GO:0003700
Sto13g2047 296 MobiDBLite consensus disorder prediction 155 203 - -
Sto13g2047 296 Gene3D WRKY domain 84 156 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2047 Sto-Chr13 27714728 27716149 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2047 1 274 WRKY Transcription Factor Family AT1G29280 52.128 1.58e-80 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto13g2047 WRKY 3.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2047 - - gmx:100127392 335.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2047 13 27714728 27716149 Sto13g2047 13 27714728 27716149 ECH