Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2022 ATGCCGGGGAGCAATTATAACTGCAGTCCTTCGCCTACCACACCCAGATCTAGATTAGAAAGGCTTCTGAGGGAAAGAGAGATAAGGAAATCCAACAAGTATTTCCTACCAACTGAGGAGGCAAGAGATGGCTACAAAGAGCTAGAACAACTTTATAGTGATTTCAGTGCTGGTGAGAATAACATTCGCGAAGAAGAGGTATTGGAAAAGATTGCAGCTTTAAGATTGTCGGAAAGATTTCAGAATCAAGAAGAGAGGCCATCCAAACAACGCTTGTTAGTGGTGGCCAACAGGTTGCCTGTCTCTGCCATTAGAAGGGGTGTAAAGGAGTTTGACACCAGGTGGATTGGTTGGGCTGGAGTAAATGTGCCAGATGATGTAGGGCAGAAAGCGTTAATTAAAGCTTTAGCTGAAAAGAGATGCATCCCAGTATTTCTTGATGAGGAGATAGTTCATCAATACTACAATGGTTACTGCAACAACATCTTATGGCCTCTCTTTCACTACCTAGGGCTTCCACAAGAGGACCGACTTGCTACCACCCGTAGTTTCCAATCACAATTTGATGCATATAAGATAGCAAATCAAATGTTTGCAGATGTGGTAAATAAGCATTATGAAGAAGGAGATGTTGTTTGGTGTCATGATTACCACCTTATGTTTCTTCCAAAATGTTTGAAAGAACataataagaaaatgaaagtTGGCTGGTTTCTCCACACACCTTTTCCTTCCTCAGAAATACATAGGACACTGCCATCCAGATCAGAACTGTTGAGATCTGTACTGGCTGCTGACTTGGTGGGATTTCATACTTATGATTATGCAAGGCATTTTGTTAGTGCCTGTACTCGTATTCTTGGACTTGAAGGTACACCTGAAGGAGTAGAGGATCATGGGAAGCTGACTCGTGTGGCTGCGTTTCCTATTGGGATTGACTCTGAACGATTTATCCGAGCCCTTGAACTCCCTCAAGTACAGGATCATATAAGAGAACTGAAAGAAAGATTTGGAGGCCGAAAGGTAATGCTGGGTGTTGATCGTCTTGATATGATAAAAGGAATACCCCAAAAAATCTTGGCATTTGAAAAGTTCCTTGAGGAGAATCCTGACTGGCATGATAAAGTTGTCTTGCTGCAAATTGCCGTTCCTACAAGGACTGATGTCGCTGAATCATTTTCTTCGATTTTTAAAGCTCCAATGCTGCATTTTAGAGCTCTTGCTGAAGTAGTGGACATGAATGAGGGTCATCATTCTGTAAAACTTGTTGCTTTGGCAGACCAAAGGCTTACAAGTCAGGTGCATGAAATTGTTGGACGCATTAATGGAAGATTTGGAACACTTACTGCTGTTCCAATACATCACCTGGATCGTTCACTTGACTTTCACGCACTATGTGCACTATATGCTGTTACAGGTGCAGCGCAGTCTCTTGGTGCAGGTGCTGTCTTGGTAAATCCATGGAATATCACAGAGGTTGCTGCCTCTATTGCTTATGCCTTGAACATGCCTGCTGATGAAAGAGAGAAGCGGCACCAGTTTAACTTTAAGCATGTTACTACTCACACATCACAGGAGTGGGCTGCAACTTTTGTGAGTGAACTGAATGACACCATTGTCGAAGCTCAGCTTAGGACGAGACAAGTTCCACCATTACTTCCCAACGAAGCTGCAGTTCATTGTTACTCAATATCCAATAATCGATTAATCATACTGCCGAAGATTAGTTCCTTCTCACCATCACTTAGTCAACTTGCTGTGACTGCTTTACAGGGTTTCAACAACACTTTGACTGAACCAGTGGATGCCCTTGGAAGGGGTGGTCAAATTAGAGAACTGGATCTTAAATTGCACCCAAACTTAAAAGATCCTTTAAAGAAGTTATCTGATGATCCAAAGACAACAGTAGTTGTTCTGAGCGGGAGCGATCGAGGTGTCCTGGACAAAAACTTTAGTGAATACAACATGTGGCTGGCAGCAGAAAATGGGATGTTTCTACGTCTTACTACCGGTGAATGGATGACCACCATGCCTGAAAATTTAAACATGGATTGGGTTGATAGTGTGAAGcaagtttttgagtaCTTCACCGAAAGAACACCGCGATCCCATTTTGAGATGCGTGAGACTTCAATTGTATGGAATTACAAGTACGCAGATGTTGAGTTCGGAAGGATTCAAGCAAGAGACCTGCTACAGCATCTTTGGACAGGCCCAATATCAAATGCATTACTTGAAGTGGTACAAGGTGGTCGATCTGTTGAGGTTCGAGCAGTCGGTGTTTCAAAGGGAGCAGCTATTGATCGGATCCTGGGAGAGATTGTTCATCACAAAGGCATGAAGGCACCAATTGATTATGTTCTTTGTGTTGGACACTTTCTACCAAAGGATGAAGATGTGTATACATTTTTTGAGCCAGAGCTTCCTTCTGAAACACCACTATTAGCAAGAGGCATGCTATCCAATTCCTATAGGCCATCTCTGCCAAAATTCTCAACCAGCAAAACCGGGTTGTCCAAGGCGGCTCGACTGAAGAAGCAACTCTCCATGTCAACATTGGAGAAGAGAGGACTGGATCATGCAACTGAAACTCCTTGGCGGCCAACATATCGTGATAGAATATCATTGCAGGAGGGCTCTTCAGTGCTTGATCTTAAAGGTGATAATTACTTTTCTTGCGCTGTTGCACGAAAGAGTTCGAGTGCCCGATATCTTCTTAAAACATCAAATAATGTGGTGGATCTGTTGAAGGACCTATCTGATCATGCATCACCACCATCAACTTGA 2787 0.4263 MPGSNYNCSPSPTTPRSRLERLLREREIRKSNKYFLPTEEARDGYKELEQLYSDFSAGENNIREEEVLEKIAALRLSERFQNQEERPSKQRLLVVANRLPVSAIRRGVKEFDTRWIGWAGVNVPDDVGQKALIKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFDAYKIANQMFADVVNKHYEEGDVVWCHDYHLMFLPKCLKEHNKKMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDHGKLTRVAAFPIGIDSERFIRALELPQVQDHIRELKERFGGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPDWHDKVVLLQIAVPTRTDVAESFSSIFKAPMLHFRALAEVVDMNEGHHSVKLVALADQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTGAAQSLGAGAVLVNPWNITEVAASIAYALNMPADEREKRHQFNFKHVTTHTSQEWAATFVSELNDTIVEAQLRTRQVPPLLPNEAAVHCYSISNNRLIILPKISSFSPSLSQLAVTALQGFNNTLTEPVDALGRGGQIRELDLKLHPNLKDPLKKLSDDPKTTVVVLSGSDRGVLDKNFSEYNMWLAAENGMFLRLTTGEWMTTMPENLNMDWVDSVKQVFEYFTERTPRSHFEMRETSIVWNYKYADVEFGRIQARDLLQHLWTGPISNALLEVVQGGRSVEVRAVGVSKGAAIDRILGEIVHHKGMKAPIDYVLCVGHFLPKDEDVYTFFEPELPSETPLLARGMLSNSYRPSLPKFSTSKTGLSKAARLKKQLSMSTLEKRGLDHATETPWRPTYRDRISLQEGSSVLDLKGDNYFSCAVARKSSSARYLLKTSNNVVDLLKDLSDHASPPST 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2022 928 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 428 472 - -
Sto13g2022 928 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 65 391 - -
Sto13g2022 928 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 472 919 - -
Sto13g2022 928 Gene3D Glycogen Phosphorylase B; 319 471 - -
Sto13g2022 928 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 90 391 - -
Sto13g2022 928 CDD GT20_TPS 91 536 IPR001830 GO:0003824|GO:0005992
Sto13g2022 928 Pfam Glycosyltransferase family 20 472 536 IPR001830 GO:0003824|GO:0005992
Sto13g2022 928 Pfam Glycosyltransferase family 20 428 471 IPR001830 GO:0003824|GO:0005992
Sto13g2022 928 Pfam Glycosyltransferase family 20 95 391 IPR001830 GO:0003824|GO:0005992
Sto13g2022 928 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 472 919 IPR001830 GO:0003824|GO:0005992
Sto13g2022 928 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 428 472 IPR001830 GO:0003824|GO:0005992
Sto13g2022 928 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 65 391 IPR001830 GO:0003824|GO:0005992
Sto13g2022 928 SUPERFAMILY HAD-like 614 775 IPR036412 -
Sto13g2022 928 Gene3D Glycogen Phosphorylase B; 522 532 - -
Sto13g2022 928 Gene3D Glycogen Phosphorylase B; 82 318 - -
Sto13g2022 928 Pfam Trehalose-phosphatase 615 808 IPR003337 GO:0003824|GO:0005992
Sto13g2022 928 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 402 539 - -
Sto13g2022 928 CDD HAD_TPP 592 807 - -
Sto13g2022 928 Gene3D Glycogen Phosphorylase B; 472 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2022 Sto-Chr13 27514419 27525205 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2022 1 926 Trehalose Biosynthesis Gene Families AT1G78580 65.209 0.0 1241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2022 K16055 - gmx:100816642 1378.62